CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_05773
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00002943
T33740_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00002943
RRM
35
105
IYIGGLPYDLSEGDVVTIFSQYGEPVHVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRMLR
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
70 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
An07g05140
Aspergillus niger
CADANGAG00005786
N
0.958
ANIA_04665
Aspergillus nidulans
CADANIAG00005768
N
0.944
ACLA_012010
Aspergillus clavatus
CADACLAG00000982
N
0.930
fgenesh1_pg.00771_#_290
Aspergillus carbonarius
fgenesh1_pg.00771_#_290
N
0.930
BDBG_01138
Blastomyces dermatitidis
BDBG_01138
N
0.915
Pc22g16450
Penicillium chrysogenum
Pc22g16450
N
0.915
PMAA_079770
Penicillium marneffei
PMAA_079770
N
0.901
PABG_03870
Paracoccidioides brasiliensis
PABG_03870
N
0.901
ARB_06649
Arthroderma benhamiae
ARB_06649
N
0.901
MCYG_01624
Microsporum canis
MCYG_01624
N
0.901
TEQG_02324
Trichophyton equinum
TEQG_02324
N
0.901
TERG_07863
Trichophyton rubrum
TERG_07863
N
0.901
NFIA_078760
Neosartorya fischeri
CADNFIAG00007376
N
0.901
TRV_02420
Trichophyton verrucosum
TRV_02420
N
0.901
TESG_00774
Trichophyton tonsurans
TESG_00774
N
0.901
HCAG_00719
Histoplasma capsulatum
HCAG_00719
N
0.887
MGYG_04448
Microsporum gypseum
MGYG_04448
N
0.887
CIMG_06780
Coccidioides immitis
CIMG_06780
N
0.873
CPSG_07351
Coccidioides posadasii
CPSG_07351
N
0.873
UREG_03685
Uncinocarpus reesii
UREG_03685
N
0.859
SS1G_03313
Sclerotinia sclerotiorum
SS1G_03313
N
0.831
GSTUMT00000089001
Tuber melanosporum
GSTUMT00000089001
N
0.831
e_gw1.18.2245.1
Nectria haematococca
e_gw1.18.2245.1
N
0.803
BC1G_09608
Botrytis cinerea
BC1G_09608
N
0.803
gw1.16.255.1
Trichoderma reesei
gw1.16.255.1
N
0.803
estExt_Genewise1.C_21128
Neurospora discreta
estExt_Genewise1.C_21128
N
0.789
estExt_fgenesh1_pg.C_chr_10724
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_10724
N
0.789
estExt_Genewise1Plus.C_180344
Neurospora tetrasperma
estExt_Genewise1Plus.C_180344
N
0.789
NCU02467
Neurospora crassa
NCU02467
N
0.789
estExt_fgenesh1_kg.C_50230
Cryphonectria parasitica
estExt_fgenesh1_kg.C_50230
N
0.789
e_gw1.1.4685.1
Myceliophthora thermophila
e_gw1.1.4685.1
N
0.775
gw1.1.2440.1
Mucor circinelloides
gw1.1.2440.1
N
0.775
fgenesh1_pm.C_scaffold_1000287
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_1000287
N
0.775
gw1.5.1175.1
Trichoderma atroviride
gw1.5.1175.1
N
0.775
e_gw1.1.5996.1
Thielavia terrestris
e_gw1.1.5996.1
N
0.775
e_gw1.12.826.1
Trichoderma virens
e_gw1.12.826.1
N
0.775
FGSG_09419
Fusarium graminearum
FGSG_09419
N
0.761
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.761
AB08288.1
Alternaria brassicicola
AB08288.1
N
0.761
VDBG_02287
Verticillium albo atrum
VDBG_02287
N
0.761
EAT89749.2
Phaeosphaeria nodorum
EAT89749.2
N
0.761
CHGG_06716
Chaetomium globosum
CHGG_06716
N
0.761
estExt_Genewise1.C_160643
Cochliobolus heterostrophus C5
estExt_Genewise1.C_160643
N
0.761
SNOG_03018
Stagonospora nodorum
SNOG_03018
N
0.761
Pa_1_22200
Podospora anserina
Pa_1_22200
N
0.761
VDAG_02758
Verticillium dahliae
VDAG_02758
N
0.761
MGG_03086
Magnaporthe oryzae
MGG_03086
N
0.761
FOXG_06071
Fusarium oxysporum
FOXG_06071
N
0.746
gw1.4.2036.1
Heterobasidion annosum
gw1.4.2036.1
N
0.746
PTRG_01927
Pyrenophora tritici repentis
PTRG_01927
N
0.746
FVEG_03939
Fusarium verticillioides
FVEG_03939
N
0.732
gw1.4.1321.1
Pleurotus ostreatus
gw1.4.1321.1
N
0.732
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.732
estExt_fgenesh2_kg.C_140042
Agaricus bisporus
estExt_fgenesh2_kg.C_140042
N
0.732
CC1G_01457
Coprinopsis cinerea
CC1G_01457
N
0.732
GLRG_07641
Colletotrichum graminicola
GLRG_07641
N
0.732
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.718
AGAP000977
Anopheles gambiae
AGAP000977
N
0.718
estExt_fgenesh3_pg.C_500008
Postia placenta
estExt_fgenesh3_pg.C_500008
N
0.718
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.718
CAGL0J01914g
Candida glabrata
CAGL0J01914g
N
0.718
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.704
CBN24057
Caenorhabditis brenneri
CBN24057
N
0.704
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.704
e_gw1.2.1042.1
Sporobolomyces roseus
e_gw1.2.1042.1
N
0.704
Bm1_02690
Brugia malayi
Bm1_02690
N
0.704
gwh2.2.841.1
Phanerochaete chrysosporium
gwh2.2.841.1
N
0.704
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.704
estExt_fgenesh2_kg.C_42587
Serpula lacrymans
estExt_fgenesh2_kg.C_42587
N
0.704
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.704