An07g05140 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00005786 T33553_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00005675 RRM 35 105

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.986
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.972
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.958
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.930
TERG_07863 Trichophyton rubrum TERG_07863 N 0.930
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.930
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.930
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.930
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.930
MCYG_01624 Microsporum canis MCYG_01624 N 0.930
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.915
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.915
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.915
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.915
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.915
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.901
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.887
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.887
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.887
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.873
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.831
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.831
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.831
estExt_fgenesh1_pg.C_chr_10724 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10724 N 0.831
fgenesh1_pm.C_scaffold_1000287 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_1000287 N 0.817
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.817
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.789
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.789
e_gw1.18.2245.1 Nectria haematococca e_gw1.18.2245.1 N 0.789
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.789
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.789
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.789
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.789
NCU02467 Neurospora crassa NCU02467 N 0.775
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.775
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.775
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.775
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.775
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.775
gw1.1.2440.1 Mucor circinelloides gw1.1.2440.1 N 0.775
AB08288.1 Alternaria brassicicola AB08288.1 N 0.761
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.761
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.761
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.746
FGSG_09419 Fusarium graminearum FGSG_09419 N 0.746
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.746
VDAG_02758 Verticillium dahliae VDAG_02758 N 0.732
CC1G_01457 Coprinopsis cinerea CC1G_01457 N 0.732
CHGG_06716 Chaetomium globosum CHGG_06716 N 0.732
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.732
VDBG_02287 Verticillium albo atrum VDBG_02287 N 0.732
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.718
PHUM617480 Pediculus humanus PHUM617480 N 0.718
gw1.4.2036.1 Heterobasidion annosum gw1.4.2036.1 N 0.718
DGIL_AUG5s13597g2t1 Acyrtosiphon pisum DGIL_AUG5s13597g2t1 N 0.718
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.718
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.718
nasonia_NCBI_hmm382923 Nasonia vitripennis nasonia_NCBI_hmm382923 N 0.704
WUBG_13107 Wuchereria bancrofti WUBG_13107 N 0.704
RBMX2 Tetraodon nigroviridis ENSTNIG00000007672 N 0.704
CAGL0J01914g Candida glabrata CAGL0J01914g N 0.704
Bm1_02690 Brugia malayi Bm1_02690 N 0.704
gw1.4.1321.1 Pleurotus ostreatus gw1.4.1321.1 N 0.704
estExt_fgenesh2_kg.C_140042 Agaricus bisporus estExt_fgenesh2_kg.C_140042 N 0.704
gw1.462.53.1 Capitella teleta gw1.462.53.1 N 0.704
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.704