estExt_fgenesh2_kg.C_140042 (Agaricus bisporus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh2_kg.C_140042 T56268_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_kg.C_140042 RRM 34 104

Links

Other RRM family RBPs
Other Agaricus bisporus RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.4.2036.1 Heterobasidion annosum gw1.4.2036.1 N 0.887
gwh1.4.608.1 Laccaria bicolor gwh1.4.608.1 N 0.873
estExt_fgenesh3_pg.C_500008 Postia placenta estExt_fgenesh3_pg.C_500008 N 0.859
gwh2.2.841.1 Phanerochaete chrysosporium gwh2.2.841.1 N 0.859
CC1G_01457 Coprinopsis cinerea CC1G_01457 N 0.845
estExt_fgenesh2_kg.C_42587 Serpula lacrymans estExt_fgenesh2_kg.C_42587 N 0.831
estExt_Genewise1Plus.C_10678 Schizophyllum commune estExt_Genewise1Plus.C_10678 N 0.831
gw1.4.1321.1 Pleurotus ostreatus gw1.4.1321.1 N 0.803
gw1.1.3012.1 Tremella mesenterica gw1.1.3012.1 N 0.761
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.732
DGIL_AUG5s13597g2t1 Acyrtosiphon pisum DGIL_AUG5s13597g2t1 N 0.732
AGAP000977 Anopheles gambiae AGAP000977 N 0.732
gw1.462.53.1 Capitella teleta gw1.462.53.1 N 0.718
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.718
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.718
nasonia_NCBI_hmm382923 Nasonia vitripennis nasonia_NCBI_hmm382923 N 0.718
estExtDG_Genewise1.C_160043 Emiliania huxleyi estExtDG_Genewise1.C_160043 N 0.718
estExtDG_fgenesh_newKGs_kg.C_2300001 Emiliania huxleyi estExtDG_fgenesh_newKGs_kg.C_2300001 N 0.718
estExtDG_fgenesh_newKGs_kg.C_80246 Emiliania huxleyi estExtDG_fgenesh_newKGs_kg.C_80246 N 0.718
gw1.1.945.1 Micromonas pusilla gw1.1.945.1 N 0.718
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.704
e_gw1.98.15.1 Volvox carteri e_gw1.98.15.1 N 0.704
An07g05140 Aspergillus niger CADANGAG00005786 N 0.704
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.704
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.704
gw1.1.2440.1 Mucor circinelloides gw1.1.2440.1 N 0.704