Pc22g16450 (Penicillium chrysogenum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pc22g16450 T58014_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pc22g16450.t1 RRM 35 105

Links

Other RRM family RBPs
Other Penicillium chrysogenum RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.944
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.930
An07g05140 Aspergillus niger CADANGAG00005786 N 0.915
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.915
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.915
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.915
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.915
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.915
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.915
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.901
TERG_07863 Trichophyton rubrum TERG_07863 N 0.901
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.901
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.901
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.901
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.901
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.901
MCYG_01624 Microsporum canis MCYG_01624 N 0.901
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.887
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.887
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.887
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.845
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.845
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.845
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.845
estExt_fgenesh1_pg.C_chr_10724 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10724 N 0.817
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.817
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.817
NCU02467 Neurospora crassa NCU02467 N 0.803
AB08288.1 Alternaria brassicicola AB08288.1 N 0.803
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.803
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.803
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.803
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.803
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.803
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.803
fgenesh1_pm.C_scaffold_1000287 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_1000287 N 0.803
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.789
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.789
e_gw1.18.2245.1 Nectria haematococca e_gw1.18.2245.1 N 0.789
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.775
FGSG_09419 Fusarium graminearum FGSG_09419 N 0.775
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.775
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.775
gw1.1.2440.1 Mucor circinelloides gw1.1.2440.1 N 0.761
gw1.4.2036.1 Heterobasidion annosum gw1.4.2036.1 N 0.761
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.761
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.761
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.746
VDBG_02287 Verticillium albo atrum VDBG_02287 N 0.746
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.746
CHGG_06716 Chaetomium globosum CHGG_06716 N 0.746
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.746
VDAG_02758 Verticillium dahliae VDAG_02758 N 0.746
CAGL0J01914g Candida glabrata CAGL0J01914g N 0.732
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.718
estExt_fgenesh3_pg.C_500008 Postia placenta estExt_fgenesh3_pg.C_500008 N 0.718
gw1.4.1321.1 Pleurotus ostreatus gw1.4.1321.1 N 0.718
estExt_fgenesh2_kg.C_140042 Agaricus bisporus estExt_fgenesh2_kg.C_140042 N 0.718
cwf29 Schizosaccharomyces pombe SPBC887.05c N 0.704
AGAP000977 Anopheles gambiae AGAP000977 N 0.704
DGIL_AUG5s13597g2t1 Acyrtosiphon pisum DGIL_AUG5s13597g2t1 N 0.704
CC1G_01457 Coprinopsis cinerea CC1G_01457 N 0.704
RBMX2 Tetraodon nigroviridis ENSTNIG00000007672 N 0.704
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.704
gwh2.2.841.1 Phanerochaete chrysosporium gwh2.2.841.1 N 0.704