CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGG_08641
(
Magnaporthe oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGG_08641
T29777_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_08641T0
RRM
169
234
VYVGRIHVTDDIEEVVARHFAEWGQVERIRVLNQRGVAFITYTNEANAQFAKEAMAHQSLDHNEIL
Links
Other
RRM
family RBPs
Other
Magnaporthe oryzae
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SS1G_00605
Sclerotinia sclerotiorum
SS1G_00605
N
0.924
estExt_fgenesh2_pm.C_20569
Thielavia terrestris
estExt_fgenesh2_pm.C_20569
N
0.909
GLRG_03078
Colletotrichum graminicola
GLRG_03078
N
0.909
BC1G_06564
Botrytis cinerea
BC1G_06564
N
0.909
e_gw1.3.641.1
Myceliophthora thermophila
e_gw1.3.641.1
N
0.909
PABG_06740
Paracoccidioides brasiliensis
PABG_06740
N
0.909
ANIA_02245
Aspergillus nidulans
CADANIAG00008932
N
0.894
NFIA_036360
Neosartorya fischeri
CADNFIAG00003276
N
0.894
ARB_07115
Arthroderma benhamiae
ARB_07115
N
0.894
estExt_Genewise1Plus.C_130268
Cryphonectria parasitica
estExt_Genewise1Plus.C_130268
N
0.894
AFUA_5G06760
Aspergillus fumigatus
CADAFUAG00006062
N
0.894
ACLA_010070
Aspergillus clavatus
CADACLAG00001255
N
0.894
TERG_04085
Trichophyton rubrum
TERG_04085
N
0.894
TRV_04903
Trichophyton verrucosum
TRV_04903
N
0.894
MCYG_06871
Microsporum canis
MCYG_06871
N
0.894
TEQG_02969
Trichophyton equinum
TEQG_02969
N
0.894
CIMG_05989
Coccidioides immitis
CIMG_05989
N
0.879
FOXG_07884
Fusarium oxysporum
FOXG_07884
N
0.879
FVEG_04805
Fusarium verticillioides
FVEG_04805
N
0.879
estExt_Genewise1Plus.C_240300
Neurospora tetrasperma
estExt_Genewise1Plus.C_240300
N
0.879
CPSG_06979
Coccidioides posadasii
CPSG_06979
N
0.879
estExt_fgenesh3_pm.C_10433
Neurospora discreta
estExt_fgenesh3_pm.C_10433
N
0.879
MGYG_03738
Microsporum gypseum
MGYG_03738
N
0.879
NCU01184
Neurospora crassa
NCU01184
N
0.879
VDAG_08466
Verticillium dahliae
VDAG_08466
N
0.879
HCAG_08381
Histoplasma capsulatum
HCAG_08381
N
0.864
CHGG_07724
Chaetomium globosum
CHGG_07724
N
0.864
BDBG_03718
Blastomyces dermatitidis
BDBG_03718
N
0.864
UREG_04374
Uncinocarpus reesii
UREG_04374
N
0.864
VDBG_00182
Verticillium albo atrum
VDBG_00182
N
0.848
e_gw1.6.1129.1
Nectria haematococca
e_gw1.6.1129.1
N
0.848
PMAA_084580
Penicillium marneffei
PMAA_084580
N
0.818
cwf2
Schizosaccharomyces pombe
SPAC3A12.11c
N
0.803
e_gw1.21.438.1
Mycosphaerella fijiensis
e_gw1.21.438.1
N
0.788
SPOG_04952
Schizosaccharomyces cryophilus
SPOG_04952
N
0.788
SJAG_04898
Schizosaccharomyces japonicus
SJAG_04898
N
0.773
estExt_Genewise1.C_chr_81258
Mycosphaerella graminicola
estExt_Genewise1.C_chr_81258
N
0.773
SOCG_02324
Schizosaccharomyces octosporus
SOCG_02324
N
0.773
Pa_2_10560
Podospora anserina
Pa_2_10560
N
0.758
Pc21g17950
Penicillium chrysogenum
Pc21g17950
N
0.758