SJAG_04898 (Schizosaccharomyces japonicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SJAG_04898 T30580_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SJAG_04898T0 RRM 174 239

Links

Other RRM family RBPs
Other Schizosaccharomyces japonicus RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPOG_04952 Schizosaccharomyces cryophilus SPOG_04952 N 0.924
SOCG_02324 Schizosaccharomyces octosporus SOCG_02324 N 0.909
cwf2 Schizosaccharomyces pombe SPAC3A12.11c N 0.864
CPSG_06979 Coccidioides posadasii CPSG_06979 N 0.803
CIMG_05989 Coccidioides immitis CIMG_05989 N 0.803
PABG_06740 Paracoccidioides brasiliensis PABG_06740 N 0.803
NFIA_036360 Neosartorya fischeri CADNFIAG00003276 N 0.788
MCYG_06871 Microsporum canis MCYG_06871 N 0.788
AFUA_5G06760 Aspergillus fumigatus CADAFUAG00006062 N 0.788
ARB_07115 Arthroderma benhamiae ARB_07115 N 0.788
ANIA_02245 Aspergillus nidulans CADANIAG00008932 N 0.788
TERG_04085 Trichophyton rubrum TERG_04085 N 0.788
TRV_04903 Trichophyton verrucosum TRV_04903 N 0.788
MGYG_03738 Microsporum gypseum MGYG_03738 N 0.788
VDAG_08466 Verticillium dahliae VDAG_08466 N 0.788
TEQG_02969 Trichophyton equinum TEQG_02969 N 0.788
ACLA_010070 Aspergillus clavatus CADACLAG00001255 N 0.788
GLRG_03078 Colletotrichum graminicola GLRG_03078 N 0.773
e_gw1.6.1129.1 Nectria haematococca e_gw1.6.1129.1 N 0.773
MGG_08641 Magnaporthe oryzae MGG_08641 N 0.773
e_gw1.21.438.1 Mycosphaerella fijiensis e_gw1.21.438.1 N 0.773
e_gw1.3.641.1 Myceliophthora thermophila e_gw1.3.641.1 N 0.773
estExt_fgenesh2_pm.C_20569 Thielavia terrestris estExt_fgenesh2_pm.C_20569 N 0.773
estExt_Genewise1Plus.C_130268 Cryphonectria parasitica estExt_Genewise1Plus.C_130268 N 0.758
estExt_fgenesh3_pm.C_10433 Neurospora discreta estExt_fgenesh3_pm.C_10433 N 0.758
NCU01184 Neurospora crassa NCU01184 N 0.758
estExt_Genewise1Plus.C_240300 Neurospora tetrasperma estExt_Genewise1Plus.C_240300 N 0.758
UREG_04374 Uncinocarpus reesii UREG_04374 N 0.758
estExt_Genewise1.C_chr_81258 Mycosphaerella graminicola estExt_Genewise1.C_chr_81258 N 0.758
HCAG_08381 Histoplasma capsulatum HCAG_08381 N 0.742
VDBG_00182 Verticillium albo atrum VDBG_00182 N 0.742
SS1G_00605 Sclerotinia sclerotiorum SS1G_00605 N 0.742
FVEG_04805 Fusarium verticillioides FVEG_04805 N 0.742
FOXG_07884 Fusarium oxysporum FOXG_07884 N 0.742
BC1G_06564 Botrytis cinerea BC1G_06564 N 0.742
BDBG_03718 Blastomyces dermatitidis BDBG_03718 N 0.742
CHGG_07724 Chaetomium globosum CHGG_07724 N 0.742
PMAA_084580 Penicillium marneffei PMAA_084580 N 0.742
estExt_fgenesh2_pg.C_30499 Agaricus bisporus estExt_fgenesh2_pg.C_30499 N 0.710
gww2.4.309.1 Phanerochaete chrysosporium gww2.4.309.1 N 0.710