e_gw1.6.1129.1 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.6.1129.1 T50070_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.6.1129.1 RRM 176 241

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VDAG_08466 Verticillium dahliae VDAG_08466 N 0.894
FOXG_07884 Fusarium oxysporum FOXG_07884 N 0.894
FVEG_04805 Fusarium verticillioides FVEG_04805 N 0.894
GLRG_03078 Colletotrichum graminicola GLRG_03078 N 0.879
CHGG_07724 Chaetomium globosum CHGG_07724 N 0.864
estExt_fgenesh2_pm.C_20569 Thielavia terrestris estExt_fgenesh2_pm.C_20569 N 0.864
NCU01184 Neurospora crassa NCU01184 N 0.864
estExt_fgenesh3_pm.C_10433 Neurospora discreta estExt_fgenesh3_pm.C_10433 N 0.864
e_gw1.3.641.1 Myceliophthora thermophila e_gw1.3.641.1 N 0.864
estExt_Genewise1Plus.C_240300 Neurospora tetrasperma estExt_Genewise1Plus.C_240300 N 0.864
VDBG_00182 Verticillium albo atrum VDBG_00182 N 0.848
ANIA_02245 Aspergillus nidulans CADANIAG00008932 N 0.848
SS1G_00605 Sclerotinia sclerotiorum SS1G_00605 N 0.848
MGG_08641 Magnaporthe oryzae MGG_08641 N 0.848
BC1G_06564 Botrytis cinerea BC1G_06564 N 0.833
CPSG_06979 Coccidioides posadasii CPSG_06979 N 0.818
PABG_06740 Paracoccidioides brasiliensis PABG_06740 N 0.818
AFUA_5G06760 Aspergillus fumigatus CADAFUAG00006062 N 0.818
ACLA_010070 Aspergillus clavatus CADACLAG00001255 N 0.818
NFIA_036360 Neosartorya fischeri CADNFIAG00003276 N 0.818
CIMG_05989 Coccidioides immitis CIMG_05989 N 0.818
e_gw1.21.438.1 Mycosphaerella fijiensis e_gw1.21.438.1 N 0.818
estExt_Genewise1Plus.C_130268 Cryphonectria parasitica estExt_Genewise1Plus.C_130268 N 0.818
TRV_04903 Trichophyton verrucosum TRV_04903 N 0.803
Pa_2_10560 Podospora anserina Pa_2_10560 N 0.803
TERG_04085 Trichophyton rubrum TERG_04085 N 0.803
PMAA_084580 Penicillium marneffei PMAA_084580 N 0.803
TEQG_02969 Trichophyton equinum TEQG_02969 N 0.803
MCYG_06871 Microsporum canis MCYG_06871 N 0.803
ARB_07115 Arthroderma benhamiae ARB_07115 N 0.803
MGYG_03738 Microsporum gypseum MGYG_03738 N 0.788
HCAG_08381 Histoplasma capsulatum HCAG_08381 N 0.788
BDBG_03718 Blastomyces dermatitidis BDBG_03718 N 0.788
UREG_04374 Uncinocarpus reesii UREG_04374 N 0.788
SPOG_04952 Schizosaccharomyces cryophilus SPOG_04952 N 0.788
estExt_Genewise1.C_chr_81258 Mycosphaerella graminicola estExt_Genewise1.C_chr_81258 N 0.788
cwf2 Schizosaccharomyces pombe SPAC3A12.11c N 0.788
SJAG_04898 Schizosaccharomyces japonicus SJAG_04898 N 0.773
SOCG_02324 Schizosaccharomyces octosporus SOCG_02324 N 0.773
Pc21g17950 Penicillium chrysogenum Pc21g17950 N 0.758