CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ANIA_02245
(
Aspergillus nidulans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADANIAG00008932
T33651_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00008932
RRM
199
264
LYVGRIHVTDDIEEVVARHFAEWGQIDRTRVLTSRGVAFVTYTNEANAQFAKEAMAHQSLDHNEIL
Links
Other
RRM
family RBPs
Other
Aspergillus nidulans
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NFIA_036360
Neosartorya fischeri
CADNFIAG00003276
N
0.970
ACLA_010070
Aspergillus clavatus
CADACLAG00001255
N
0.970
AFUA_5G06760
Aspergillus fumigatus
CADAFUAG00006062
N
0.970
MCYG_06871
Microsporum canis
MCYG_06871
N
0.909
CIMG_05989
Coccidioides immitis
CIMG_05989
N
0.909
PABG_06740
Paracoccidioides brasiliensis
PABG_06740
N
0.909
TERG_04085
Trichophyton rubrum
TERG_04085
N
0.909
TRV_04903
Trichophyton verrucosum
TRV_04903
N
0.909
ARB_07115
Arthroderma benhamiae
ARB_07115
N
0.909
TEQG_02969
Trichophyton equinum
TEQG_02969
N
0.909
CPSG_06979
Coccidioides posadasii
CPSG_06979
N
0.909
estExt_fgenesh2_pm.C_20569
Thielavia terrestris
estExt_fgenesh2_pm.C_20569
N
0.894
e_gw1.3.641.1
Myceliophthora thermophila
e_gw1.3.641.1
N
0.894
UREG_04374
Uncinocarpus reesii
UREG_04374
N
0.894
MGYG_03738
Microsporum gypseum
MGYG_03738
N
0.894
MGG_08641
Magnaporthe oryzae
MGG_08641
N
0.894
PMAA_084580
Penicillium marneffei
PMAA_084580
N
0.879
VDAG_08466
Verticillium dahliae
VDAG_08466
N
0.879
estExt_fgenesh3_pm.C_10433
Neurospora discreta
estExt_fgenesh3_pm.C_10433
N
0.864
estExt_Genewise1Plus.C_240300
Neurospora tetrasperma
estExt_Genewise1Plus.C_240300
N
0.864
GLRG_03078
Colletotrichum graminicola
GLRG_03078
N
0.864
NCU01184
Neurospora crassa
NCU01184
N
0.864
e_gw1.6.1129.1
Nectria haematococca
e_gw1.6.1129.1
N
0.848
BDBG_03718
Blastomyces dermatitidis
BDBG_03718
N
0.848
CHGG_07724
Chaetomium globosum
CHGG_07724
N
0.848
SS1G_00605
Sclerotinia sclerotiorum
SS1G_00605
N
0.848
HCAG_08381
Histoplasma capsulatum
HCAG_08381
N
0.848
VDBG_00182
Verticillium albo atrum
VDBG_00182
N
0.848
estExt_Genewise1Plus.C_130268
Cryphonectria parasitica
estExt_Genewise1Plus.C_130268
N
0.833
BC1G_06564
Botrytis cinerea
BC1G_06564
N
0.833
e_gw1.21.438.1
Mycosphaerella fijiensis
e_gw1.21.438.1
N
0.818
SPOG_04952
Schizosaccharomyces cryophilus
SPOG_04952
N
0.803
Pc21g17950
Penicillium chrysogenum
Pc21g17950
N
0.803
cwf2
Schizosaccharomyces pombe
SPAC3A12.11c
N
0.788
FOXG_07884
Fusarium oxysporum
FOXG_07884
N
0.788
FVEG_04805
Fusarium verticillioides
FVEG_04805
N
0.788
SOCG_02324
Schizosaccharomyces octosporus
SOCG_02324
N
0.788
SJAG_04898
Schizosaccharomyces japonicus
SJAG_04898
N
0.788
estExt_Genewise1.C_chr_81258
Mycosphaerella graminicola
estExt_Genewise1.C_chr_81258
N
0.773
Pa_2_10560
Podospora anserina
Pa_2_10560
N
0.758