VDAG_08466 (Verticillium dahliae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 VDAG_08466 T31426_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDAG_08466T0 RRM 186 251

Links

Other RRM family RBPs
Other Verticillium dahliae RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VDBG_00182 Verticillium albo atrum VDBG_00182 N 0.939
estExt_Genewise1Plus.C_130268 Cryphonectria parasitica estExt_Genewise1Plus.C_130268 N 0.894
e_gw1.6.1129.1 Nectria haematococca e_gw1.6.1129.1 N 0.894
CHGG_07724 Chaetomium globosum CHGG_07724 N 0.894
GLRG_03078 Colletotrichum graminicola GLRG_03078 N 0.894
SS1G_00605 Sclerotinia sclerotiorum SS1G_00605 N 0.894
estExt_Genewise1Plus.C_240300 Neurospora tetrasperma estExt_Genewise1Plus.C_240300 N 0.879
PABG_06740 Paracoccidioides brasiliensis PABG_06740 N 0.879
MGG_08641 Magnaporthe oryzae MGG_08641 N 0.879
estExt_fgenesh3_pm.C_10433 Neurospora discreta estExt_fgenesh3_pm.C_10433 N 0.879
BC1G_06564 Botrytis cinerea BC1G_06564 N 0.879
ANIA_02245 Aspergillus nidulans CADANIAG00008932 N 0.879
NCU01184 Neurospora crassa NCU01184 N 0.879
CIMG_05989 Coccidioides immitis CIMG_05989 N 0.864
CPSG_06979 Coccidioides posadasii CPSG_06979 N 0.864
estExt_fgenesh2_pm.C_20569 Thielavia terrestris estExt_fgenesh2_pm.C_20569 N 0.864
e_gw1.3.641.1 Myceliophthora thermophila e_gw1.3.641.1 N 0.864
FOXG_07884 Fusarium oxysporum FOXG_07884 N 0.848
HCAG_08381 Histoplasma capsulatum HCAG_08381 N 0.848
ACLA_010070 Aspergillus clavatus CADACLAG00001255 N 0.848
AFUA_5G06760 Aspergillus fumigatus CADAFUAG00006062 N 0.848
NFIA_036360 Neosartorya fischeri CADNFIAG00003276 N 0.848
FVEG_04805 Fusarium verticillioides FVEG_04805 N 0.848
PMAA_084580 Penicillium marneffei PMAA_084580 N 0.848
BDBG_03718 Blastomyces dermatitidis BDBG_03718 N 0.848
TERG_04085 Trichophyton rubrum TERG_04085 N 0.833
TEQG_02969 Trichophyton equinum TEQG_02969 N 0.833
MCYG_06871 Microsporum canis MCYG_06871 N 0.833
TRV_04903 Trichophyton verrucosum TRV_04903 N 0.833
ARB_07115 Arthroderma benhamiae ARB_07115 N 0.833
UREG_04374 Uncinocarpus reesii UREG_04374 N 0.818
MGYG_03738 Microsporum gypseum MGYG_03738 N 0.818
SPOG_04952 Schizosaccharomyces cryophilus SPOG_04952 N 0.803
e_gw1.21.438.1 Mycosphaerella fijiensis e_gw1.21.438.1 N 0.803
cwf2 Schizosaccharomyces pombe SPAC3A12.11c N 0.788
Pc21g17950 Penicillium chrysogenum Pc21g17950 N 0.788
SJAG_04898 Schizosaccharomyces japonicus SJAG_04898 N 0.788
SOCG_02324 Schizosaccharomyces octosporus SOCG_02324 N 0.788
estExt_Genewise1.C_chr_81258 Mycosphaerella graminicola estExt_Genewise1.C_chr_81258 N 0.758
Pa_2_10560 Podospora anserina Pa_2_10560 N 0.758