SOCG_02324 (Schizosaccharomyces octosporus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SOCG_02324 T30681_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SOCG_02324T0 RRM 176 241

Links

Other RRM family RBPs
Other Schizosaccharomyces octosporus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPOG_04952 Schizosaccharomyces cryophilus SPOG_04952 N 0.985
SJAG_04898 Schizosaccharomyces japonicus SJAG_04898 N 0.909
cwf2 Schizosaccharomyces pombe SPAC3A12.11c N 0.879
estExt_Genewise1Plus.C_240300 Neurospora tetrasperma estExt_Genewise1Plus.C_240300 N 0.818
NCU01184 Neurospora crassa NCU01184 N 0.818
estExt_fgenesh3_pm.C_10433 Neurospora discreta estExt_fgenesh3_pm.C_10433 N 0.818
PABG_06740 Paracoccidioides brasiliensis PABG_06740 N 0.803
estExt_fgenesh2_pm.C_20569 Thielavia terrestris estExt_fgenesh2_pm.C_20569 N 0.803
e_gw1.3.641.1 Myceliophthora thermophila e_gw1.3.641.1 N 0.803
TERG_04085 Trichophyton rubrum TERG_04085 N 0.788
estExt_Genewise1.C_chr_81258 Mycosphaerella graminicola estExt_Genewise1.C_chr_81258 N 0.788
VDAG_08466 Verticillium dahliae VDAG_08466 N 0.788
MCYG_06871 Microsporum canis MCYG_06871 N 0.788
ARB_07115 Arthroderma benhamiae ARB_07115 N 0.788
TEQG_02969 Trichophyton equinum TEQG_02969 N 0.788
AFUA_5G06760 Aspergillus fumigatus CADAFUAG00006062 N 0.788
ACLA_010070 Aspergillus clavatus CADACLAG00001255 N 0.788
NFIA_036360 Neosartorya fischeri CADNFIAG00003276 N 0.788
ANIA_02245 Aspergillus nidulans CADANIAG00008932 N 0.788
TRV_04903 Trichophyton verrucosum TRV_04903 N 0.788
GLRG_03078 Colletotrichum graminicola GLRG_03078 N 0.773
CPSG_06979 Coccidioides posadasii CPSG_06979 N 0.773
MGYG_03738 Microsporum gypseum MGYG_03738 N 0.773
HCAG_08381 Histoplasma capsulatum HCAG_08381 N 0.773
CIMG_05989 Coccidioides immitis CIMG_05989 N 0.773
MGG_08641 Magnaporthe oryzae MGG_08641 N 0.773
BDBG_03718 Blastomyces dermatitidis BDBG_03718 N 0.773
CHGG_07724 Chaetomium globosum CHGG_07724 N 0.773
e_gw1.6.1129.1 Nectria haematococca e_gw1.6.1129.1 N 0.773
PMAA_084580 Penicillium marneffei PMAA_084580 N 0.758
e_gw1.21.438.1 Mycosphaerella fijiensis e_gw1.21.438.1 N 0.758
SS1G_00605 Sclerotinia sclerotiorum SS1G_00605 N 0.742
VDBG_00182 Verticillium albo atrum VDBG_00182 N 0.742
BC1G_06564 Botrytis cinerea BC1G_06564 N 0.742
FOXG_07884 Fusarium oxysporum FOXG_07884 N 0.742
FVEG_04805 Fusarium verticillioides FVEG_04805 N 0.742
estExt_Genewise1Plus.C_130268 Cryphonectria parasitica estExt_Genewise1Plus.C_130268 N 0.727
UREG_04374 Uncinocarpus reesii UREG_04374 N 0.727