CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UREG_02520
(
Uncinocarpus reesii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
UREG_02520
T31337_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
URET_02520
RRM
242
307
LFLTGVEDDLPEHAIRTFFSPFGTIRSLICSHRSHCAFVNYATRETAEAAAAHCQGKAVIQGCPLR
Links
Other
RRM
family RBPs
Other
Uncinocarpus reesii
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CIMG_08445
Coccidioides immitis
CIMG_08445
N
0.939
CPSG_08272
Coccidioides posadasii
CPSG_08272
N
0.924
BDBG_08699
Blastomyces dermatitidis
BDBG_08699
N
0.879
PABG_03629
Paracoccidioides brasiliensis
PABG_03629
N
0.879
ACLA_054770
Aspergillus clavatus
CADACLAG00005233
N
0.864
TEQG_04110
Trichophyton equinum
TEQG_04110
N
0.864
TESG_01774
Trichophyton tonsurans
TESG_01774
N
0.864
MGYG_08476
Microsporum gypseum
MGYG_08476
N
0.848
HCAG_07565
Histoplasma capsulatum
HCAG_07565
N
0.848
ARB_05996
Arthroderma benhamiae
ARB_05996
N
0.833
TRV_06346
Trichophyton verrucosum
TRV_06346
N
0.833
MCYG_02745
Microsporum canis
MCYG_02745
N
0.833
TERG_05432
Trichophyton rubrum
TERG_05432
N
0.833
NFIA_029780
Neosartorya fischeri
CADNFIAG00002898
N
0.803
AFLA_041240
Aspergillus flavus
CADAFLAG00005451
N
0.803
AFUA_4G03640
Aspergillus fumigatus
CADAFUAG00001443
N
0.803
AO090011000290
Aspergillus oryzae
CADAORAG00005058
N
0.803
ATEG_02173
Aspergillus terreus
CADATEAG00000030
N
0.803
PMAA_006050
Penicillium marneffei
PMAA_006050
N
0.788
Pc12g14830
Penicillium chrysogenum
Pc12g14830
N
0.788
ANIA_07145
Aspergillus nidulans
CADANIAG00000312
N
0.788
An14g01580
Aspergillus niger
CADANGAG00011093
N
0.788
fgenesh1_pg.00795_#_104
Aspergillus carbonarius
fgenesh1_pg.00795_#_104
N
0.773
SS1G_03468
Sclerotinia sclerotiorum
SS1G_03468
N
0.758
BC1G_07906
Botrytis cinerea
BC1G_07906
N
0.758
fgenesh5_pg.C_scaffold_6000164
Trichoderma reesei
fgenesh5_pg.C_scaffold_6000164
N
0.758
VDAG_01644
Verticillium dahliae
VDAG_01644
N
0.758
fgenesh1_pg.C_scaffold_1000369
Trichoderma virens
fgenesh1_pg.C_scaffold_1000369
N
0.742
GLRG_02677
Colletotrichum graminicola
GLRG_02677
N
0.712
estExt_Genewise1Plus.C_chr_31411
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_31411
N
0.712
MGG_10567
Magnaporthe oryzae
MGG_10567
N
0.712
estExt_Genewise1Plus.C_22014
Trichoderma atroviride
estExt_Genewise1Plus.C_22014
N
0.712