SS1G_03468 (Sclerotinia sclerotiorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SS1G_03468 T30967_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_03468 RRM 240 305

Links

Other RRM family RBPs
Other Sclerotinia sclerotiorum RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_07906 Botrytis cinerea BC1G_07906 N 1.000
estExt_Genewise1Plus.C_22014 Trichoderma atroviride estExt_Genewise1Plus.C_22014 N 0.803
FGSG_12577 Fusarium graminearum FGSG_12577 N 0.773
FOXG_15630 Fusarium oxysporum FOXG_15630 N 0.773
fgenesh5_pg.C_scaffold_6000164 Trichoderma reesei fgenesh5_pg.C_scaffold_6000164 N 0.773
estExt_fgenesh1_pg.C_50213 Cryphonectria parasitica estExt_fgenesh1_pg.C_50213 N 0.773
FVEG_13092 Fusarium verticillioides FVEG_13092 N 0.758
fgenesh1_pg.C_scaffold_1000369 Trichoderma virens fgenesh1_pg.C_scaffold_1000369 N 0.758
UREG_02520 Uncinocarpus reesii UREG_02520 N 0.758
AO090011000290 Aspergillus oryzae CADAORAG00005058 N 0.742
VDAG_01644 Verticillium dahliae VDAG_01644 N 0.742
ACLA_054770 Aspergillus clavatus CADACLAG00005233 N 0.742
AFLA_041240 Aspergillus flavus CADAFLAG00005451 N 0.742
CPSG_08272 Coccidioides posadasii CPSG_08272 N 0.727
PMAA_006050 Penicillium marneffei PMAA_006050 N 0.727
CIMG_08445 Coccidioides immitis CIMG_08445 N 0.727
BDBG_08699 Blastomyces dermatitidis BDBG_08699 N 0.727
HCAG_07565 Histoplasma capsulatum HCAG_07565 N 0.727
PABG_03629 Paracoccidioides brasiliensis PABG_03629 N 0.727
fgenesh2_pm.1_#_1388 Thielavia terrestris fgenesh2_pm.1_#_1388 N 0.727
MGYG_08476 Microsporum gypseum MGYG_08476 N 0.727
MCYG_02745 Microsporum canis MCYG_02745 N 0.712
GLRG_02677 Colletotrichum graminicola GLRG_02677 N 0.712
MGG_10567 Magnaporthe oryzae MGG_10567 N 0.712
Pc12g14830 Penicillium chrysogenum Pc12g14830 N 0.712
ANIA_07145 Aspergillus nidulans CADANIAG00000312 N 0.712
AFUA_4G03640 Aspergillus fumigatus CADAFUAG00001443 N 0.712
TRV_06346 Trichophyton verrucosum TRV_06346 N 0.712
NFIA_029780 Neosartorya fischeri CADNFIAG00002898 N 0.712
estExt_Genewise1Plus.C_chr_31411 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_31411 N 0.712
ARB_05996 Arthroderma benhamiae ARB_05996 N 0.712
TERG_05432 Trichophyton rubrum TERG_05432 N 0.712
CHGG_06140 Chaetomium globosum CHGG_06140 N 0.712