CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL008164
(
Aedes aegypti
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAEL008164
T32375_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL008164-PA
RRM
36
113
LIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNFHRSQDAEQAVNVLNGLRLQNKVLK
AAEL008164-PA
RRM
129
198
LYISGLPKTITQEELETIFRPYGEIITSRVLVQEGNDKPKGVGFIRFDQRKEAERAIAALNGTTPKGLTD
AAEL008164-PA
RRM
278
348
IFIYNLAPETEENTLWQLFGPFGAVQNVKVIKDSATNQCKGYGFVTMTNYEEAMLAIRSLNGYTLGQRVLQ
Links
Other
RRM
family RBPs
Other
Aedes aegypti
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ008385
Culex pipiens
CpipJ_CPIJ008385
N
0.986
CPIJ008385
Culex quinquefasciatus
CPIJ008385
N
0.986
AGAP001883
Anopheles gambiae
AGAP001883
N
0.973
GD16475
Drosophila simulans
FBgn0188089
N
0.764
GM19036
Drosophila sechellia
FBgn0173939
N
0.764
GG12756
Drosophila erecta
FBgn0105043
N
0.764
nasonia_NCBI_hmm330804
Nasonia vitripennis
nasonia_NCBI_hmm330804
I
0.732
amel4_ncbi_hmm5219
Apis mellifera
amel4_ncbi_hmm5219
I
0.718
CpipJ_CPIJ016143
Culex pipiens
CpipJ_CPIJ016143
I
0.709
CPIJ016143
Culex quinquefasciatus
CPIJ016143
I
0.709
GL26299
Drosophila persimilis
FBgn0163881
I
0.705
AGAP000965
Anopheles gambiae
AGAP000965
I
0.705
GH13638
Drosophila grimshawi
FBgn0121114
I
0.700
Rbp9
Drosophila melanogaster
FBgn0010263
D
0.700