BRADI1G61250 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI1G61250 T33162_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G61250.1 RRM 79 149
BRADI1G61250.1 RRM 189 259
BRADI1G61250.2 RRM 79 149
BRADI1G61250.2 RRM 189 257

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G042683 Zea mays GRMZM2G042683 N 0.880
SB01G034120 Sorghum bicolor Sb01g034120 N 0.873
LOC_Os03g25960 Oryza sativa LOC_Os03g25960 N 0.859
BGIOSIBCE011310 Oryza indica BGIOSIBCE011310 N 0.859
BGIOSIBCE025708 Oryza indica BGIOSIBCE025708 N 0.796
LOC_Os07g43810 Oryza sativa LOC_Os07g43810 N 0.796
BRADI1G20440 Brachypodium distachyon BRADI1G20440 N 0.782
GRMZM2G068715 Zea mays GRMZM2G068715 N 0.782
GRMZM2G158835 Zea mays GRMZM2G158835 N 0.782
SB02G040260 Sorghum bicolor Sb02g040260 N 0.775
AT2G37220 Arabidopsis thaliana AT2G37220-TAIR-G N 0.761
XM_002881451.1 Arabidopsis lyrata fgenesh2_kg.4__1774__AT2G37220.1 N 0.754
cassava17995.valid.m1 Manihot esculenta cassava17995.valid.m1 N 0.754
mgf013487m Mimulus guttatus mgf013487m N 0.746
CP29 Arabidopsis thaliana AT3G53460-TAIR-G N 0.739
cassava23556.valid.m1 Manihot esculenta cassava23556.valid.m1 N 0.739
cassava23555.valid.m1 Manihot esculenta cassava23555.valid.m1 N 0.739
XM_002877875.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001832 N 0.739
Glyma13g20830.1 Glycine max Glyma13g20830.1 N 0.734
B9IFN7_POPTR Populus trichocarpa POPTR_0016s09190 N 0.732
B9MTC6_POPTR Populus trichocarpa POPTR_0006s12910 N 0.732
ppa009295m Prunus persica ppa009295m N 0.732
Cucsa.306870 Cucumis sativus Cucsa.306870 N 0.725
Medtr1g076830 Medicago truncatula Medtr1g076830 N 0.725
30078.m002323 Ricinus communis 30078.m002323 N 0.718
Glyma10g06620.1 Glycine max Glyma10g06620.1 N 0.711
cassava23554.valid.m1 Manihot esculenta cassava23554.valid.m1 N 0.707