SB02G040260 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb02g040260 T45949_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb02g040260.1 RRM 80 150
Sb02g040260.1 RRM 186 256

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G158835 Zea mays GRMZM2G158835 N 0.979
GRMZM2G068715 Zea mays GRMZM2G068715 N 0.958
BGIOSIBCE025708 Oryza indica BGIOSIBCE025708 N 0.944
LOC_Os07g43810 Oryza sativa LOC_Os07g43810 N 0.944
BRADI1G20440 Brachypodium distachyon BRADI1G20440 N 0.923
SB01G034120 Sorghum bicolor Sb01g034120 N 0.831
GRMZM2G042683 Zea mays GRMZM2G042683 N 0.831
BGIOSIBCE011310 Oryza indica BGIOSIBCE011310 N 0.824
LOC_Os03g25960 Oryza sativa LOC_Os03g25960 N 0.824
mgf013487m Mimulus guttatus mgf013487m N 0.782
BRADI1G61250 Brachypodium distachyon BRADI1G61250 N 0.775
ppa009295m Prunus persica ppa009295m N 0.775
cassava23555.valid.m1 Manihot esculenta cassava23555.valid.m1 N 0.761
Medtr1g076830 Medicago truncatula Medtr1g076830 N 0.761
cassava23556.valid.m1 Manihot esculenta cassava23556.valid.m1 N 0.761
AT2G37220 Arabidopsis thaliana AT2G37220-TAIR-G N 0.754
cassava17995.valid.m1 Manihot esculenta cassava17995.valid.m1 N 0.754
30078.m002323 Ricinus communis 30078.m002323 N 0.746
Glyma13g20830.1 Glycine max Glyma13g20830.1 N 0.741
XM_002881451.1 Arabidopsis lyrata fgenesh2_kg.4__1774__AT2G37220.1 N 0.739
Cucsa.306870 Cucumis sativus Cucsa.306870 N 0.739
Glyma10g06620.1 Glycine max Glyma10g06620.1 N 0.732
B9IFN7_POPTR Populus trichocarpa POPTR_0016s09190 N 0.725
XM_002877875.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001832 N 0.725
CP29 Arabidopsis thaliana AT3G53460-TAIR-G N 0.725
cassava23554.valid.m1 Manihot esculenta cassava23554.valid.m1 N 0.718
B9MTC6_POPTR Populus trichocarpa POPTR_0006s12910 N 0.704