GRMZM2G042683 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G042683 T54036_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G042683_P01 RRM 83 153
GRMZM2G042683_P01 RRM 179 249

Links

Other RRM family RBPs
Other Zea mays RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB01G034120 Sorghum bicolor Sb01g034120 N 0.965
LOC_Os03g25960 Oryza sativa LOC_Os03g25960 N 0.930
BGIOSIBCE011310 Oryza indica BGIOSIBCE011310 N 0.930
BRADI1G61250 Brachypodium distachyon BRADI1G61250 N 0.880
BGIOSIBCE025708 Oryza indica BGIOSIBCE025708 N 0.838
GRMZM2G068715 Zea mays GRMZM2G068715 N 0.838
LOC_Os07g43810 Oryza sativa LOC_Os07g43810 N 0.838
GRMZM2G158835 Zea mays GRMZM2G158835 N 0.838
SB02G040260 Sorghum bicolor Sb02g040260 N 0.831
BRADI1G20440 Brachypodium distachyon BRADI1G20440 N 0.824
AT2G37220 Arabidopsis thaliana AT2G37220-TAIR-G N 0.810
mgf013487m Mimulus guttatus mgf013487m N 0.810
XM_002881451.1 Arabidopsis lyrata fgenesh2_kg.4__1774__AT2G37220.1 N 0.796
cassava23555.valid.m1 Manihot esculenta cassava23555.valid.m1 N 0.789
cassava23556.valid.m1 Manihot esculenta cassava23556.valid.m1 N 0.789
cassava17995.valid.m1 Manihot esculenta cassava17995.valid.m1 N 0.782
30078.m002323 Ricinus communis 30078.m002323 N 0.782
Glyma13g20830.1 Glycine max Glyma13g20830.1 N 0.776
Medtr1g076830 Medicago truncatula Medtr1g076830 N 0.775
ppa009295m Prunus persica ppa009295m N 0.775
B9IFN7_POPTR Populus trichocarpa POPTR_0016s09190 N 0.761
Glyma10g06620.1 Glycine max Glyma10g06620.1 N 0.761
Cucsa.306870 Cucumis sativus Cucsa.306870 N 0.754
CP29 Arabidopsis thaliana AT3G53460-TAIR-G N 0.746
XM_002877875.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001832 N 0.746
cassava23554.valid.m1 Manihot esculenta cassava23554.valid.m1 N 0.746
B9MTC6_POPTR Populus trichocarpa POPTR_0006s12910 N 0.732