BRADI3G38990 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI3G38990 T33251_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G38990.1 RRM 190 260

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI4G33020 Brachypodium distachyon BRADI4G33020 N 0.901
SB07G028810 Sorghum bicolor Sb07g028810 N 0.887
BGIOSIBCE030316 Oryza indica BGIOSIBCE030316 N 0.873
GRMZM2G475495 Zea mays GRMZM2G475495 N 0.873
LOC_Os09g29980 Oryza sativa LOC_Os09g29980 N 0.873
GRMZM2G131957 Zea mays GRMZM2G131957 N 0.859
Glyma08g44150.1 Glycine max Glyma08g44150.1 N 0.845
29629.m001380 Ricinus communis 29629.m001380 N 0.845
ppa002096m Prunus persica ppa002096m N 0.845
LOC_Os08g38240 Oryza sativa LOC_Os08g38240 N 0.845
BGIOSIBCE028312 Oryza indica BGIOSIBCE028312 N 0.845
Glyma18g08590.1 Glycine max Glyma18g08590.1 N 0.831
GRMZM2G107163 Zea mays GRMZM2G107163 N 0.831
Glyma08g44170.1 Glycine max Glyma08g44170.1 N 0.831
Glyma18g08610.1 Glycine max Glyma18g08610.1 N 0.831
cassava7045.valid.m1 Manihot esculenta cassava7045.valid.m1 N 0.831
cassava7046.valid.m1 Manihot esculenta cassava7046.valid.m1 N 0.831
MDP0000138972 Malus x domestica MDP0000138972 N 0.803
MDP0000643975 Malus x domestica MDP0000643975 N 0.803
PK28815.1 Cannabis sativa PK28815.1 N 0.803
AT5G55670 Arabidopsis thaliana AT5G55670-TAIR-G N 0.803
MDP0000551492 Malus x domestica MDP0000551492 N 0.803
Cucsa.059360 Cucumis sativus Cucsa.059360 N 0.789
mgf006948m Mimulus guttatus mgf006948m N 0.789
XM_002866061.1 Arabidopsis lyrata fgenesh2_kg.8__1470__AT5G55670.1 N 0.789
MDP0000162382 Malus x domestica MDP0000162382 N 0.775
chr6.CM0245.280.nd Lotus japonicus chr6.CM0245.280.nd N 0.775
29929.m004777 Ricinus communis 29929.m004777 N 0.746
ppa002814m Prunus persica ppa002814m N 0.732
cassava35777.valid.m1 Manihot esculenta cassava35777.valid.m1 N 0.732
B9HTF7_POPTR Populus trichocarpa POPTR_0010s06150 N 0.718
B9HLD1_POPTR Populus trichocarpa POPTR_0008s18280 N 0.718
MDP0000491894 Malus x domestica MDP0000491894 N 0.704
PDK_20s1577201g001 Phoenix dactylifera PDK_20s1577201g001 N 0.704