ppa002096m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa002096m T58326_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa002096m RRM 246 316

Links

Other RRM family RBPs
Other Prunus persica RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000551492 Malus x domestica MDP0000551492 N 0.958
MDP0000138972 Malus x domestica MDP0000138972 N 0.958
MDP0000643975 Malus x domestica MDP0000643975 N 0.958
Glyma08g44150.1 Glycine max Glyma08g44150.1 N 0.944
Glyma18g08590.1 Glycine max Glyma18g08590.1 N 0.930
Glyma18g08610.1 Glycine max Glyma18g08610.1 N 0.930
MDP0000162382 Malus x domestica MDP0000162382 N 0.930
cassava7045.valid.m1 Manihot esculenta cassava7045.valid.m1 N 0.915
29629.m001380 Ricinus communis 29629.m001380 N 0.915
cassava7046.valid.m1 Manihot esculenta cassava7046.valid.m1 N 0.915
Cucsa.059360 Cucumis sativus Cucsa.059360 N 0.901
Glyma08g44170.1 Glycine max Glyma08g44170.1 N 0.901
mgf006948m Mimulus guttatus mgf006948m N 0.887
PK28815.1 Cannabis sativa PK28815.1 N 0.887
BRADI4G33020 Brachypodium distachyon BRADI4G33020 N 0.873
AT5G55670 Arabidopsis thaliana AT5G55670-TAIR-G N 0.873
XM_002866061.1 Arabidopsis lyrata fgenesh2_kg.8__1470__AT5G55670.1 N 0.859
chr6.CM0245.280.nd Lotus japonicus chr6.CM0245.280.nd N 0.859
BGIOSIBCE028312 Oryza indica BGIOSIBCE028312 N 0.845
GRMZM2G131957 Zea mays GRMZM2G131957 N 0.845
GRMZM2G475495 Zea mays GRMZM2G475495 N 0.845
BRADI3G38990 Brachypodium distachyon BRADI3G38990 N 0.845
LOC_Os08g38240 Oryza sativa LOC_Os08g38240 N 0.845
SB07G028810 Sorghum bicolor Sb07g028810 N 0.845
LOC_Os09g29980 Oryza sativa LOC_Os09g29980 N 0.831
BGIOSIBCE030316 Oryza indica BGIOSIBCE030316 N 0.831
GRMZM2G107163 Zea mays GRMZM2G107163 N 0.817
MDP0000491894 Malus x domestica MDP0000491894 N 0.803
ppa002814m Prunus persica ppa002814m N 0.803
cassava35777.valid.m1 Manihot esculenta cassava35777.valid.m1 N 0.789
PK06988.1 Cannabis sativa PK06988.1 N 0.789
29929.m004777 Ricinus communis 29929.m004777 N 0.775
MDP0000642690 Malus x domestica MDP0000642690 N 0.775
PDK_20s1577201g001 Phoenix dactylifera PDK_20s1577201g001 N 0.746
e_gw1.138.6.1 Physcomitrella patens e_gw1.138.6.1 N 0.746
B9HLD1_POPTR Populus trichocarpa POPTR_0008s18280 N 0.746
e_gw1.42.153.1 Physcomitrella patens e_gw1.42.153.1 N 0.746
B9HTF7_POPTR Populus trichocarpa POPTR_0010s06150 N 0.746