CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER1
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000008386
T34657_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000008230
RRM
39
102
VLIRGLPADVANQEVHDLLSDYELKYCFVDKYKGTAFVTFLNGEQAESAIKKFHLSKLRDKEIT
ENSACAP00000008230
RRM
112
182
LCIANLPQLYTQQQFEDLVRPFGNLERCFLVYNEKTGHSKGYGFVEYMKKDSAARAKSDLLGKQLGTRTLY
ENSACAP00000008230
RRM
201
271
LCVDKLPHNYSDVEELRQTFSTICPPTFCQLACGQDGQLKGFAVLEYESSEIAEMVQQATNGLPLAGNHIR
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER1
Monodelphis domestica
ENSMODG00000005584
N
0.811
RAVER1
Sus scrofa
ENSSSCG00000013650
N
0.762
RAVER1
Loxodonta africana
ENSLAFG00000003664
N
0.757
A4FUZ2_BOVIN
Bos taurus
ENSBTAG00000015721
N
0.757
RAVER1
Pteropus vampyrus
ENSPVAG00000003689
N
0.757
RAVER1
Spermophilus tridecemlineatus
ENSSTOG00000003241
N
0.757
RAVER1
Cavia porcellus
ENSCPOG00000001008
N
0.757
RAVER1
Canis familiaris
ENSCAFG00000017861
N
0.757
Raver1
Dipodomys ordii
ENSDORG00000010106
N
0.757
RAVER1
Tursiops truncatus
ENSTTRG00000009552
N
0.752
Raver1
Rattus norvegicus
ENSRNOG00000020710
N
0.752
RAVER1
Oryctolagus cuniculus
ENSOCUG00000020918
N
0.752
RAVER1
Microcebus murinus
ENSMICG00000010326
N
0.752
RAVER1
Felis catus
ENSFCAG00000009435
N
0.748
RAVER1
Equus caballus
ENSECAG00000024966
N
0.748
Raver1
Mus musculus
ENSMUSG00000010205
N
0.733
Ame_R009605
Ailuropoda melanoleuca
Ame_R009605
N
0.728
RAVER1
Homo sapiens
ENSG00000161847
N
0.728
RAVER1
Gorilla gorilla
ENSGGOG00000006015
N
0.728
RAVER1
Pan troglodytes
ENSPTRG00000010466
N
0.728
ENSPPYG00000010514
Pongo pygmaeus
ENSPPYG00000010514
N
0.723
RAVER1
Macropus eugenii
ENSMEUG00000003281
N
0.718