CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER1
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000005584
T39087_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000006917
RRM
69
132
ILIRGLPGDVTNQEVHDLLSDYELKYCFVDKYKGTAFVTLLNGEQAESAIRTFHQSHLRDKELS
ENSMODP00000006917
RRM
142
212
LCIANLPPSYTQQQFEELVRPFGNLERCFLVYSERSGHSKGYGFVEYMKKDSAARAKSDLLGKPLGPRTLY
ENSMODP00000006917
RRM
231
301
LCVDHLPQGYSDVDELRQALSSVHPPTFCQLAYGQDGQLKGFAVLEYETSQMAEEAQQQADGLVLAGNSVR
ENSMODP00000006920
RRM
61
124
ILIRGLPGDVTNQEVHDLLSDYELKYCFVDKYKGTAFVTLLNGEQAESAIRTFHQSHLRDKELS
ENSMODP00000006920
RRM
134
204
LCIANLPPSYTQQQFEELVRPFGNLERCFLVYSERSGHSKGYGFVEYMKKDSAARAKSDLLGKPLGPRTLY
ENSMODP00000006920
RRM
223
293
LCVDHLPQGYSDVDELRQALSSVHPPTFCQLAYGQDGQLKGFAVLEYETSQMAEEAQQQADGLVLAGNSVR
ENSMODP00000033614
RRM
9
45
PPGGRDQPAFVTLLNGEQAESAIRTFHQSHLRDKELS
ENSMODP00000033614
RRM
55
125
LCIANLPPSYTQQQFEELVRPFGNLERCFLVYSERSGHSKGYGFVEYMKKDSAARAKSDLLGKPLGPRTLY
ENSMODP00000033614
RRM
144
214
LCVDHLPQGYSDVDELRQALSSVHPPTFCQLAYGQDGQLKGFAVLEYETSQMAEEAQQQADGLVLAGNSVR
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
27 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER1
Macropus eugenii
ENSMEUG00000003281
N
0.897
RAVER1
Canis familiaris
ENSCAFG00000017861
N
0.879
RAVER1
Sus scrofa
ENSSSCG00000013650
N
0.879
RAVER1
Pteropus vampyrus
ENSPVAG00000003689
N
0.879
A4FUZ2_BOVIN
Bos taurus
ENSBTAG00000015721
N
0.874
RAVER1
Loxodonta africana
ENSLAFG00000003664
N
0.874
RAVER1
Felis catus
ENSFCAG00000009435
N
0.869
Raver1
Dipodomys ordii
ENSDORG00000010106
N
0.869
RAVER1
Tursiops truncatus
ENSTTRG00000009552
N
0.869
Raver1
Rattus norvegicus
ENSRNOG00000020710
N
0.864
RAVER1
Cavia porcellus
ENSCPOG00000001008
N
0.859
RAVER1
Oryctolagus cuniculus
ENSOCUG00000020918
N
0.854
RAVER1
Spermophilus tridecemlineatus
ENSSTOG00000003241
N
0.854
RAVER1
Equus caballus
ENSECAG00000024966
N
0.850
Raver1
Mus musculus
ENSMUSG00000010205
N
0.840
RAVER1
Pan troglodytes
ENSPTRG00000010466
N
0.840
Ame_R009605
Ailuropoda melanoleuca
Ame_R009605
N
0.840
RAVER1
Homo sapiens
ENSG00000161847
N
0.840
RAVER1
Gorilla gorilla
ENSGGOG00000006015
N
0.840
RAVER1
Microcebus murinus
ENSMICG00000010326
N
0.835
ENSPPYG00000010514
Pongo pygmaeus
ENSPPYG00000010514
N
0.830
RAVER1
Anolis carolinensis
ENSACAG00000008386
N
0.811
RAVER1
Myotis lucifugus
ENSMLUG00000012328
N
0.799
RAVER1
Macaca mulatta
ENSMMUG00000014897
N
0.791
raver1
Xenopus tropicalis
ENSXETG00000011622
N
0.723
AAH70699
Xenopus laevis
AAH70699
N
0.709