LOC100399818 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000009717 T35568_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000017806 RRM 5 75
ENSCJAP00000017806 RRM 98 169
ENSCJAP00000017811 RRM 1 59

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TRNAU1AP Pteropus vampyrus ENSPVAG00000017214 N 1.000
TRNAU1AP Gorilla gorilla ENSGGOG00000003511 N 1.000
TRNAU1AP Cavia porcellus ENSCPOG00000001925 N 1.000
TRNAU1AP Tursiops truncatus ENSTTRG00000001854 N 1.000
TRNAU1AP Homo sapiens ENSG00000180098 N 1.000
TRNAU1AP Canis familiaris ENSCAFG00000011735 N 1.000
LOC100070713 Equus caballus ENSECAG00000012980 N 1.000
TRNAU1AP Myotis lucifugus ENSMLUG00000012586 N 0.993
TRNAU1AP Loxodonta africana ENSLAFG00000007628 N 0.993
TSAP1_BOVIN Bos taurus ENSBTAG00000010393 N 0.993
TRNAU1AP Tarsius syrichta ENSTSYG00000003506 N 0.993
TRNAU1AP Felis catus ENSFCAG00000013401 N 0.993
ENSOCUG00000011704 Oryctolagus cuniculus ENSOCUG00000011704 N 0.972
Trnau1ap Mus musculus ENSMUSG00000028898 N 0.972
TRNAU1AP Microcebus murinus ENSMICG00000008386 N 0.965
TRNAU1AP Monodelphis domestica ENSMODG00000010927 N 0.965
TRSPAP1 Gallus gallus ENSGALG00000001310 N 0.965
TRNAU1AP Sorex araneus ENSSARG00000007536 N 0.951
TRNAU1AP Taeniopygia guttata ENSTGUG00000000735 N 0.937
TRNAU1AP Macropus eugenii ENSMEUG00000006117 N 0.917
TRNAU1AP Meleagris gallopavo ENSMGAG00000002105 N 0.910
ENSOCUG00000002353 Oryctolagus cuniculus ENSOCUG00000002353 N 0.875
TRNAU1AP Otolemur garnettii ENSOGAG00000002274 N 0.757
TRNAU1AP Pan troglodytes ENSPTRG00000000434 N 0.757
TRNAU1AP Takifugu rubripes ENSTRUG00000003352 N 0.743
TRNAU1AP Dasypus novemcinctus ENSDNOG00000010065 N 0.734
TRNAU1AP Vicugna pacos ENSVPAG00000006778 N 0.734
Trnau1ap Dipodomys ordii ENSDORG00000006349 N 0.729
TRNAU1AP Oryzias latipes ENSORLG00000010428 N 0.729
TRNAU1AP Echinops telfairi ENSETEG00000012594 N 0.727
TRNAU1AP Gasterosteus aculeatus ENSGACG00000001443 N 0.722
TRNAU1AP Spermophilus tridecemlineatus ENSSTOG00000000079 N 0.722
Ame_R001126 Ailuropoda melanoleuca Ame_R001126 N 0.720
TRNAU1AP Tetraodon nigroviridis ENSTNIG00000006129 N 0.715