SREK1 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000013463 T42112_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000016458 RRM 7 78
ENSTNIP00000016458 RRM 164 232

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SREK1 Takifugu rubripes ENSTRUG00000002960 N 0.986
SREK1 Oryzias latipes ENSORLG00000002711 N 0.936
SREK1 Danio rerio ENSDARG00000009764 N 0.901
SFRS12 Macaca mulatta ENSMMUG00000014586 N 0.879
SREK1 Loxodonta africana ENSLAFG00000013853 N 0.879
Srek1 Mus musculus ENSMUSG00000032621 N 0.879
ENSPPYG00000015515 Pongo pygmaeus ENSPPYG00000015515 N 0.879
SREK1 Sorex araneus ENSSARG00000000795 N 0.879
SREK1 Pteropus vampyrus ENSPVAG00000009763 N 0.879
SREK1 Pan troglodytes ENSPTRG00000016936 N 0.879
SREK1 Gorilla gorilla ENSGGOG00000004737 N 0.879
Ame_R007411 Ailuropoda melanoleuca Ame_R007411 N 0.879
LOC100393736 Callithrix jacchus ENSCJAG00000015950 N 0.879
sfrs12 Xenopus tropicalis ENSXETG00000021460 N 0.879
SREK1 Echinops telfairi ENSETEG00000012977 N 0.879
SREK1 Homo sapiens ENSG00000153914 N 0.879
SREK1 Gallus gallus ENSGALG00000014775 N 0.872
SREK1 Oryctolagus cuniculus ENSOCUG00000001319 N 0.872
SREK1 Myotis lucifugus ENSMLUG00000014801 N 0.872
SREK1 Erinaceus europaeus ENSEEUG00000003430 N 0.872
SREK1 Ochotona princeps ENSOPRG00000012111 N 0.865
SREK1 Sus scrofa ENSSSCG00000016955 N 0.830
SREK1 Choloepus hoffmanni ENSCHOG00000004956 N 0.752
estExt_fgenesh2_pg.C_2190052 Branchiostoma floridae estExt_fgenesh2_pg.C_2190052 N 0.709
estExt_fgenesh2_pg.C_2190047 Branchiostoma floridae estExt_fgenesh2_pg.C_2190047 N 0.709