CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPEB2
(
Dasypus novemcinctus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDNOG00000016610
T36367_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000012875
RRM
225
261
VFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKS
ENSDNOP00000012875
RRM
344
397
XXELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQL
Links
Other
RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPEB3
Tarsius syrichta
ENSTSYG00000003928
I
0.848
CPEB3
Vicugna pacos
ENSVPAG00000002144
I
0.807
CPEB3
Myotis lucifugus
ENSMLUG00000009474
I
0.807
CPEB3
Otolemur garnettii
ENSOGAG00000002002
I
0.796
CPEB4
Tetraodon nigroviridis
ENSTNIG00000018221
I
0.780
cpeb2
Xenopus tropicalis
ENSXETG00000020324
I
0.736
CPEB3
Procavia capensis
ENSPCAG00000012417
I
0.718
Sjc_0029950
Schistosoma japonicum
Sjc_0029950
I
0.714
CPEB4
Vicugna pacos
ENSVPAG00000010897
I
0.710