CPEB3 (Otolemur garnettii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOGAG00000002002 T39811_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CPEB4
M149_0.6 		Homo sapiens UUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00158 		0.735
CPEB2
M012_0.6 		Homo sapiens CHUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00012 		0.721
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000001787 RRM 439 476
ENSOGAP00000001787 RRM 545 612

Links

Other RRM family RBPs
Other Otolemur garnettii RBPs

116 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPEB3 Myotis lucifugus ENSMLUG00000009474 I 0.927
CPEB3 Vicugna pacos ENSVPAG00000002144 I 0.927
CPEB4 Tetraodon nigroviridis ENSTNIG00000018221 I 0.881
CPEB3 Tarsius syrichta ENSTSYG00000003928 I 0.881
Sjc_0029950 Schistosoma japonicum Sjc_0029950 I 0.821
CPEB2 Dasypus novemcinctus ENSDNOG00000016610 N 0.796
CPEB3 Tupaia belangeri ENSTBEG00000013125 I 0.757
CPEB3 Echinops telfairi ENSETEG00000000111 I 0.757
CPEB3 Bos taurus ENSBTAG00000015450 I 0.757
CPEB3 Sus scrofa ENSSSCG00000010468 I 0.757
CPEB3 Taeniopygia guttata ENSTGUG00000008988 I 0.757
CPEB3 Loxodonta africana ENSLAFG00000018716 I 0.757
cpeb3 Xenopus tropicalis ENSXETG00000012190 I 0.757
CPEB3 Homo sapiens ENSG00000107864 I 0.757
Cpeb3 Mus musculus ENSMUSG00000039652 I 0.757
CPEB3 Monodelphis domestica ENSMODG00000006673 I 0.757
CPEB3 Anolis carolinensis ENSACAG00000006335 I 0.757
CPEB3 Canis familiaris ENSCAFG00000007423 I 0.757
LOC100392612 Callithrix jacchus ENSCJAG00000008495 I 0.757
CPEB3 Pan troglodytes ENSPTRG00000002753 I 0.757
CPEB3 Gallus gallus ENSGALG00000006912 I 0.757
ENSPPYG00000002481 Pongo pygmaeus ENSPPYG00000002481 I 0.757
Ame_R003954 Ailuropoda melanoleuca Ame_R003954 I 0.757
CPEB3 Gorilla gorilla ENSGGOG00000016441 I 0.757
CPEB3 Meleagris gallopavo ENSMGAG00000009148 I 0.757
CPEB3 Oryctolagus cuniculus ENSOCUG00000010454 I 0.757
CPEB3 Microcebus murinus ENSMICG00000017842 I 0.757
Cpeb3 Rattus norvegicus ENSRNOG00000020689 I 0.757
CPEB3 Macaca mulatta ENSMMUG00000015050 I 0.757
CPEB3 Macropus eugenii ENSMEUG00000009948 I 0.757
CPEB3 Equus caballus ENSECAG00000000077 I 0.752
CPEB3 Choloepus hoffmanni ENSCHOG00000000272 I 0.752
CPEB3 Ornithorhynchus anatinus ENSOANG00000015723 I 0.752
CPEB3 Sorex araneus ENSSARG00000001994 I 0.752
cpeb3 Danio rerio ENSDARG00000060103 I 0.737
LOC100058918 Equus caballus ENSECAG00000016921 I 0.735
Ame_R004815 Ailuropoda melanoleuca Ame_R004815 I 0.735
A7Z087_BOVIN Bos taurus ENSBTAG00000009995 I 0.735
CPEB4 Callithrix jacchus ENSCJAG00000019166 I 0.735
CPEB4 Cavia porcellus ENSCPOG00000015530 I 0.735
CPEB4 Otolemur garnettii ENSOGAG00000004243 I 0.735
CPEB4 Anolis carolinensis ENSACAG00000015039 I 0.735
CPEB4 Myotis lucifugus ENSMLUG00000014640 I 0.735
nasonia_NCBI_hmm338954 Nasonia vitripennis nasonia_NCBI_hmm338954 I 0.735
ADH10187 Xenopus laevis ADH10187 I 0.735
Cpeb4 Mus musculus ENSMUSG00000020300 I 0.735
CPEB4 Pan troglodytes ENSPTRG00000017545 I 0.735
CPEB4 Pteropus vampyrus ENSPVAG00000007863 I 0.735
Cpeb4 Rattus norvegicus ENSRNOG00000033169 I 0.735
ENSPPYG00000016058 Pongo pygmaeus ENSPPYG00000016058 I 0.735
CPEB4 Procavia capensis ENSPCAG00000007021 I 0.735
CPEB4 Ochotona princeps ENSOPRG00000002868 I 0.735
CPEB3 Oryzias latipes ENSORLG00000000726 I 0.735
CPEB4 Oryctolagus cuniculus ENSOCUG00000008971 I 0.735
CPEB4 Gorilla gorilla ENSGGOG00000010097 I 0.735
CPEB4 Loxodonta africana ENSLAFG00000016030 I 0.735
CPEB4 Monodelphis domestica ENSMODG00000006036 I 0.735
CPEB4 Tarsius syrichta ENSTSYG00000003136 I 0.735
CPEB4 Homo sapiens ENSG00000113742 D 0.735
CPEB4 Taeniopygia guttata ENSTGUG00000000329 I 0.735
CPEB4 Erinaceus europaeus ENSEEUG00000010887 I 0.735
CPEB4 Tupaia belangeri ENSTBEG00000001429 I 0.735
CPEB3 Takifugu rubripes ENSTRUG00000011309 I 0.732
CPEB3 Tetraodon nigroviridis ENSTNIG00000004021 I 0.732
CPEB4 Canis familiaris ENSCAFG00000016761 I 0.730
CPEB3 Gasterosteus aculeatus ENSGACG00000002944 I 0.730
CPEB4 Spermophilus tridecemlineatus ENSSTOG00000006077 I 0.730
CPEB4 Gasterosteus aculeatus ENSGACG00000018422 I 0.728
CPEB4 Gasterosteus aculeatus ENSGACG00000020430 I 0.728
CPEB4 Macaca mulatta ENSMMUG00000019926 I 0.728
CPEB4 Danio rerio ENSDARG00000060495 I 0.728
CPEB4 Tetraodon nigroviridis ENSTNIG00000017077 I 0.728
CPEB4 Oryzias latipes ENSORLG00000007328 I 0.728
CPEB4 Oryzias latipes ENSORLG00000001711 I 0.728
CPEB4 Takifugu rubripes ENSTRUG00000010947 I 0.728
CPEB4 Takifugu rubripes ENSTRUG00000010692 I 0.728
e_gw1.21.3.1 Lottia gigantea e_gw1.21.3.1 I 0.727
CPEB4 Ornithorhynchus anatinus ENSOANG00000003990 I 0.725
CPEB4 Gallus gallus ENSGALG00000014074 I 0.725
CPEB4 Meleagris gallopavo ENSMGAG00000003660 I 0.725
CPEB2 Loxodonta africana ENSLAFG00000007142 I 0.721
CPEB2 Meleagris gallopavo ENSMGAG00000005200 I 0.721
CPEB2 Oryctolagus cuniculus ENSOCUG00000007950 I 0.721
CPEB2 Ornithorhynchus anatinus ENSOANG00000003552 I 0.721
CPEB2 Monodelphis domestica ENSMODG00000001149 I 0.721
CPEB2 Macaca mulatta ENSMMUG00000001384 I 0.721
CPEB2 Macropus eugenii ENSMEUG00000008074 I 0.721
Cpeb2 Mus musculus ENSMUSG00000039782 I 0.721
CPEB2 Bos taurus ENSBTAG00000019847 I 0.721
Ame_R004097 Ailuropoda melanoleuca Ame_R004097 I 0.721
ENSPPYG00000014613 Pongo pygmaeus ENSPPYG00000014613 I 0.721
ENSACAG00000012015 Anolis carolinensis ENSACAG00000012015 I 0.721
CPEB2 Gorilla gorilla ENSGGOG00000004449 I 0.721
XR_025355.1 Pan troglodytes ENSPTRG00000015924 I 0.721
CPEB2 Tursiops truncatus ENSTTRG00000003940 I 0.721
CPEB2 Sus scrofa ENSSSCG00000008736 I 0.721
CPEB4 Sorex araneus ENSSARG00000013389 I 0.721
CPEB2 Canis familiaris ENSCAFG00000015372 I 0.721
CPEB2 Choloepus hoffmanni ENSCHOG00000003058 I 0.721
CPEB2 Homo sapiens ENSG00000137449 D 0.721
CPEB2 Otolemur garnettii ENSOGAG00000011237 I 0.721
CPEB2 Gallus gallus ENSGALG00000014516 I 0.721
CPEB2 Equus caballus ENSECAG00000008722 I 0.721
Cpeb2 Dipodomys ordii ENSDORG00000015311 I 0.721
LOC100402805 Callithrix jacchus ENSCJAG00000012227 I 0.721
CPEB2 Cavia porcellus ENSCPOG00000001180 I 0.721
CPEB2 Taeniopygia guttata ENSTGUG00000009822 I 0.721
gw.572.2.1 Branchiostoma floridae gw.572.2.1 I 0.715
fgenesh2_pg.scaffold_143000050 Branchiostoma floridae fgenesh2_pg.scaffold_143000050 I 0.708
e_gw1.24.94.1 Capitella teleta e_gw1.24.94.1 I 0.707
DGIL_AUG5s10609g1t1 Acyrtosiphon pisum DGIL_AUG5s10609g1t1 I 0.704
GH16131 Drosophila grimshawi FBgn0123602 I 0.704
CPEB2 Gasterosteus aculeatus ENSGACG00000013966 I 0.701
CPEB2 Oryzias latipes ENSORLG00000016222 I 0.701
CPEB2 Takifugu rubripes ENSTRUG00000013956 I 0.701
CPEB2 Tetraodon nigroviridis ENSTNIG00000017678 I 0.701