Sjc_0029950 (Schistosoma japonicum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sjc_0029950 T54791_0.6 SDSPB (2008-Sep-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CPEB4
M149_0.6 		Homo sapiens UUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00158 		0.710
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000002823 RRM 717 753
CPRT0000002823 RRM 807 877

Links

Other RRM family RBPs
Other Schistosoma japonicum RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPEB3 Myotis lucifugus ENSMLUG00000009474 I 0.865
CPEB3 Vicugna pacos ENSVPAG00000002144 I 0.865
CPEB4 Tetraodon nigroviridis ENSTNIG00000018221 I 0.864
CPEB3 Otolemur garnettii ENSOGAG00000002002 I 0.821
CPEB3 Tarsius syrichta ENSTSYG00000003928 I 0.796
CPEB4 Microcebus murinus ENSMICG00000002628 N 0.725
CPEB2 Dasypus novemcinctus ENSDNOG00000016610 N 0.714
CPEB4 Procavia capensis ENSPCAG00000007021 I 0.703
CPEB4 Otolemur garnettii ENSOGAG00000004243 I 0.703
ENSPPYG00000016058 Pongo pygmaeus ENSPPYG00000016058 I 0.703
CPEB4 Ochotona princeps ENSOPRG00000002868 I 0.703
Cpeb4 Rattus norvegicus ENSRNOG00000033169 I 0.703
CPEB4 Taeniopygia guttata ENSTGUG00000000329 I 0.703
CPEB4 Tarsius syrichta ENSTSYG00000003136 I 0.703
CPEB4 Tupaia belangeri ENSTBEG00000001429 I 0.703
CPEB3 Sorex araneus ENSSARG00000001994 I 0.703
CPEB4 Pteropus vampyrus ENSPVAG00000007863 I 0.703
CPEB4 Oryctolagus cuniculus ENSOCUG00000008971 I 0.703
CPEB4 Pan troglodytes ENSPTRG00000017545 I 0.703
CPEB4 Monodelphis domestica ENSMODG00000006036 I 0.703
CPEB4 Callithrix jacchus ENSCJAG00000019166 I 0.703
CPEB4 Cavia porcellus ENSCPOG00000015530 I 0.703
CPEB3 Equus caballus ENSECAG00000000077 I 0.703
CPEB3 Choloepus hoffmanni ENSCHOG00000000272 I 0.703
A7Z087_BOVIN Bos taurus ENSBTAG00000009995 I 0.703
ADH10187 Xenopus laevis ADH10187 I 0.703
CPEB4 Anolis carolinensis ENSACAG00000015039 I 0.703
LOC100058918 Equus caballus ENSECAG00000016921 I 0.703
CPEB4 Erinaceus europaeus ENSEEUG00000010887 I 0.703
Ame_R004815 Ailuropoda melanoleuca Ame_R004815 I 0.703
Cpeb4 Mus musculus ENSMUSG00000020300 I 0.703
CPEB4 Myotis lucifugus ENSMLUG00000014640 I 0.703
CPEB4 Loxodonta africana ENSLAFG00000016030 I 0.703
CPEB4 Homo sapiens ENSG00000113742 D 0.703
CPEB4 Gorilla gorilla ENSGGOG00000010097 I 0.703
CPEB3 Ornithorhynchus anatinus ENSOANG00000015723 I 0.703