CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRSF4
(
Gorilla gorilla
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGGOG00000002444
T37763_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000002404
RRM
2
64
VYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVI
ENSGGOP00000002404
RRM
81
131
RDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR
Links
Other
RRM
family RBPs
Other
Gorilla gorilla
RBPs
58 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRSF4
Oryctolagus cuniculus
ENSOCUG00000001837
I
0.876
Srsf4
Mus musculus
ENSMUSG00000028911
I
0.876
A7MB38_BOVIN
Bos taurus
ENSBTAG00000013309
I
0.876
SRSF4
Homo sapiens
ENSG00000116350
I
0.876
SRSF4
Tursiops truncatus
ENSTTRG00000002572
I
0.876
LOC100402973
Callithrix jacchus
ENSCJAG00000009971
I
0.876
SRSF4
Pan troglodytes
ENSPTRG00000000445
I
0.876
SRSF4
Monodelphis domestica
ENSMODG00000011052
I
0.876
SRSF4
Cavia porcellus
ENSCPOG00000007263
I
0.876
SRSF4
Dasypus novemcinctus
ENSDNOG00000000968
I
0.876
Ame_R018370
Ailuropoda melanoleuca
Ame_R018370
I
0.876
SRSF4
Sus scrofa
ENSSSCG00000003588
I
0.876
Sfrs4
Rattus norvegicus
ENSRNOG00000010007
I
0.876
SRSF4
Macaca mulatta
ENSMMUG00000007110
I
0.876
SRSF4
Erinaceus europaeus
ENSEEUG00000008479
I
0.876
ENSPPYG00000001629
Pongo pygmaeus
ENSPPYG00000001629
I
0.876
SRSF4
Ochotona princeps
ENSOPRG00000010098
I
0.868
SRSF4
Meleagris gallopavo
ENSMGAG00000002400
I
0.868
SRSF4
Loxodonta africana
ENSLAFG00000002575
I
0.868
SRSF4
Tarsius syrichta
ENSTSYG00000007903
I
0.868
SRSF4
Procavia capensis
ENSPCAG00000009879
I
0.868
Srsf4
Dipodomys ordii
ENSDORG00000002459
I
0.868
SRSF4
Myotis lucifugus
ENSMLUG00000014770
I
0.829
SRSF4
Tetraodon nigroviridis
ENSTNIG00000000115
I
0.814
SRSF4
Takifugu rubripes
ENSTRUG00000011891
I
0.814
SRSF4
Tetraodon nigroviridis
ENSTNIG00000005573
I
0.814
SRSF4
Oryzias latipes
ENSORLG00000009430
I
0.806
SRSF4
Gasterosteus aculeatus
ENSGACG00000002389
I
0.806
ENSCJAG00000031736
Callithrix jacchus
ENSCJAG00000031736
N
0.798
ENSCJAG00000010895
Callithrix jacchus
ENSCJAG00000010895
N
0.798
SFRS6
Taeniopygia guttata
ENSTGUG00000003455
I
0.752
SRSF6
Monodelphis domestica
ENSMODG00000003107
I
0.744
SRSF6
Macropus eugenii
ENSMEUG00000014615
I
0.744
srsf6
Xenopus tropicalis
ENSXETG00000025503
I
0.744
SRSF6
Anolis carolinensis
ENSACAG00000002061
I
0.744
SRSF6
Procavia capensis
ENSPCAG00000010954
I
0.744
SRSF6
Callithrix jacchus
ENSCJAG00000017888
I
0.736
srsf6a
Danio rerio
ENSDARG00000013729
I
0.736
SRSF6
Dasypus novemcinctus
ENSDNOG00000008410
I
0.736
ENSPPYG00000011019
Pongo pygmaeus
ENSPPYG00000011019
I
0.736
SRSF6
Pteropus vampyrus
ENSPVAG00000015232
I
0.736
Srsf6
Dipodomys ordii
ENSDORG00000001945
I
0.736
SRSF6
Gorilla gorilla
ENSGGOG00000009808
I
0.736
AAH46668
Xenopus laevis
AAH46668
I
0.736
SRSF6
Homo sapiens
ENSG00000124193
I
0.736
srsf4
Xenopus tropicalis
ENSXETG00000014380
I
0.729
SFRS6_BOVIN
Bos taurus
ENSBTAG00000008527
I
0.729
SRSF6
Echinops telfairi
ENSETEG00000006221
I
0.729
SRSF6
Oryzias latipes
ENSORLG00000003530
I
0.729
SRSF6
Microcebus murinus
ENSMICG00000008537
I
0.729
SRSF6
Takifugu rubripes
ENSTRUG00000003244
I
0.721
Srsf6
Mus musculus
ENSMUSG00000016921
I
0.721
Sfrs6
Rattus norvegicus
ENSRNOG00000006380
I
0.721
SRSF6
Tetraodon nigroviridis
ENSTNIG00000001692
I
0.721
AAH44265
Xenopus laevis
AAH44265
I
0.721
ENSACAG00000004096
Anolis carolinensis
ENSACAG00000004096
N
0.709
SRSF6
Gasterosteus aculeatus
ENSGACG00000006084
I
0.705
srsf6b
Danio rerio
ENSDARG00000016783
I
0.705