SRSF4 (Myotis lucifugus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMLUG00000014770 T38760_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.736
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.736
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000013443 RRM 4 66
ENSMLUP00000013443 RRM 106 169

Links

Other RRM family RBPs
Other Myotis lucifugus RBPs

134 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.953
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.953
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.953
SRSF4 Homo sapiens ENSG00000116350 I 0.953
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.953
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.953
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.953
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.953
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.953
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.953
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.953
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.953
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.953
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.953
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.953
Srsf4 Mus musculus ENSMUSG00000028911 I 0.953
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.946
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.946
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.946
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.946
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.946
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.946
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.891
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.891
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.891
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.884
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.884
ENSCJAG00000010895 Callithrix jacchus ENSCJAG00000010895 N 0.884
ENSCJAG00000031736 Callithrix jacchus ENSCJAG00000031736 N 0.884
SFRS6 Taeniopygia guttata ENSTGUG00000003455 I 0.829
SRSF4 Gorilla gorilla ENSGGOG00000002444 N 0.829
SRSF6 Monodelphis domestica ENSMODG00000003107 I 0.822
SRSF6 Anolis carolinensis ENSACAG00000002061 I 0.822
srsf6 Xenopus tropicalis ENSXETG00000025503 I 0.822
SRSF6 Macropus eugenii ENSMEUG00000014615 I 0.822
SRSF6 Procavia capensis ENSPCAG00000010954 I 0.822
SRSF6 Dasypus novemcinctus ENSDNOG00000008410 I 0.814
SRSF6 Callithrix jacchus ENSCJAG00000017888 I 0.814
SRSF6 Homo sapiens ENSG00000124193 I 0.814
SRSF6 Pteropus vampyrus ENSPVAG00000015232 I 0.814
ENSPPYG00000011019 Pongo pygmaeus ENSPPYG00000011019 I 0.814
SRSF6 Gorilla gorilla ENSGGOG00000009808 I 0.814
Srsf6 Dipodomys ordii ENSDORG00000001945 I 0.814
srsf6a Danio rerio ENSDARG00000013729 I 0.814
SRSF6 Microcebus murinus ENSMICG00000008537 I 0.806
SFRS6_BOVIN Bos taurus ENSBTAG00000008527 I 0.806
SRSF6 Oryzias latipes ENSORLG00000003530 I 0.806
AAH46668 Xenopus laevis AAH46668 I 0.806
Srsf6 Mus musculus ENSMUSG00000016921 I 0.798
srsf4 Xenopus tropicalis ENSXETG00000014380 I 0.798
SRSF6 Echinops telfairi ENSETEG00000006221 I 0.798
Sfrs6 Rattus norvegicus ENSRNOG00000006380 I 0.798
SRSF6 Takifugu rubripes ENSTRUG00000003244 I 0.798
SRSF6 Tetraodon nigroviridis ENSTNIG00000001692 I 0.791
AAH44265 Xenopus laevis AAH44265 I 0.791
srsf6b Danio rerio ENSDARG00000016783 I 0.791
SRSF6 Gasterosteus aculeatus ENSGACG00000006084 I 0.791
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.775
SRSF6 Cavia porcellus ENSCPOG00000011761 I 0.767
estExt_Genewise1Plus.C_1640045 Capitella teleta estExt_Genewise1Plus.C_1640045 I 0.760
PHUM290500 Pediculus humanus PHUM290500 I 0.752
SFRS4 Gallus gallus ENSGALG00000001411 N 0.752
XP_001180940.1 Strongylocentrotus purpuratus XP_001180940.1 I 0.744
XP_798746.1 Strongylocentrotus purpuratus XP_798746.1 I 0.744
CpipJ_CPIJ008634 Culex pipiens CpipJ_CPIJ008634 I 0.744
CPIJ008634 Culex quinquefasciatus CPIJ008634 I 0.744
e_gw1.89.27.1 Lottia gigantea e_gw1.89.27.1 I 0.744
GK13948 Drosophila willistoni FBgn0215954 I 0.736
B52 Drosophila melanogaster FBgn0004587 D 0.736
estExt_Genewise1Plus.C_sca_890186 Lottia gigantea estExt_Genewise1Plus.C_sca_890186 I 0.736
GF17608 Drosophila ananassae FBgn0094626 I 0.736
AGAP004592 Anopheles gambiae AGAP004592 I 0.729
SRSF4 Canis familiaris ENSCAFG00000011669 N 0.729
GJ24113 Drosophila virilis FBgn0211197 I 0.729
ENSCING00000012370 Ciona intestinalis ENSCING00000012370 I 0.729
ENSCING00000004873 Ciona intestinalis ENSCING00000004873 I 0.729
ENSACAG00000004096 Anolis carolinensis ENSACAG00000004096 N 0.729
GA10599-RA Drosophila pseudoobscura FBgn0070656 I 0.729
estExt_Genewise1Plus.C_150169 Daphnia pulex estExt_Genewise1Plus.C_150169 I 0.729
GI22065 Drosophila mojavensis FBgn0144794 I 0.729
GL23543 Drosophila persimilis FBgn0161133 I 0.729
GH18528 Drosophila grimshawi FBgn0125995 I 0.729
SRSF4 Ornithorhynchus anatinus ENSOANG00000015169 N 0.721
estExt_fgenesh1_pg.C_3000025 Capitella teleta estExt_fgenesh1_pg.C_3000025 I 0.721
AAH71160 Xenopus laevis AAH71160 I 0.721
SRSF4 Equus caballus ENSECAG00000021350 N 0.721
ENSCSAVG00000002581 Ciona savignyi ENSCSAVG00000002581 I 0.721
ISCW010321 Ixodes scapularis ISCW010321 I 0.721
srsf5a Danio rerio ENSDARG00000029818 I 0.721
SRSF5 Tetraodon nigroviridis ENSTNIG00000016411 I 0.721
estExt_fgenesh2_pg.C_920027 Branchiostoma floridae estExt_fgenesh2_pg.C_920027 I 0.721
SRSF5 Takifugu rubripes ENSTRUG00000017811 I 0.721
srsf5 Xenopus tropicalis ENSXETG00000002211 I 0.721
SRSF4 Microcebus murinus ENSMICG00000008965 N 0.721
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.721
SRSF4 Spermophilus tridecemlineatus ENSSTOG00000015908 N 0.721
SFRS5 Taeniopygia guttata ENSTGUG00000011425 I 0.713
SRSF5 Monodelphis domestica ENSMODG00000011362 I 0.713
PACS2 Takifugu rubripes ENSTRUG00000010740 I 0.713
srsf5b Danio rerio ENSDARG00000027734 I 0.713
SRSF5 Anolis carolinensis ENSACAG00000005143 I 0.713
XB-GENE-5954653 Xenopus tropicalis ENSXETG00000017937 I 0.713
SRSF4 Echinops telfairi ENSETEG00000009774 N 0.713
SFRS4 Taeniopygia guttata ENSTGUG00000000765 N 0.713
ENSGACG00000011761 Gasterosteus aculeatus ENSGACG00000011761 I 0.713
amel4_ncbi_hmm6583 Apis mellifera amel4_ncbi_hmm6583 I 0.713
SRSF5 Pan troglodytes ENSPTRG00000006488 I 0.705
SRSF5 Ochotona princeps ENSOPRG00000008286 I 0.705
ENSPPYG00000005945 Pongo pygmaeus ENSPPYG00000005945 I 0.705
Srsf5 Mus musculus ENSMUSG00000021134 I 0.705
SRSF5 Macaca mulatta ENSMMUG00000022407 I 0.705
SRSF5 Myotis lucifugus ENSMLUG00000011939 I 0.705
SRSF5 Homo sapiens ENSG00000100650 D 0.705
SRSF5 Loxodonta africana ENSLAFG00000005260 I 0.705
SRSF5 Oryctolagus cuniculus ENSOCUG00000009274 I 0.705
SRSF5 Gorilla gorilla ENSGGOG00000016462 I 0.705
SRSF5 Otolemur garnettii ENSOGAG00000015122 I 0.705
A6MLI3_CALJA Callithrix jacchus ENSCJAG00000014884 I 0.705
A6H7B7_BOVIN Bos taurus ENSBTAG00000011596 I 0.705
SRSF5 Canis familiaris ENSCAFG00000016589 I 0.705
SRSF5 Vicugna pacos ENSVPAG00000006448 I 0.705
AAH44085 Xenopus laevis AAH44085 I 0.705
Ame_R004936 Ailuropoda melanoleuca Ame_R004936 I 0.705
62194 Helobdella robusta 62194 I 0.705
BGIBMGA010178 Bombyx mori BGIBMGA010178 I 0.705
SRSF5 Tursiops truncatus ENSTTRG00000003318 I 0.705
SRSF5 Tarsius syrichta ENSTSYG00000007786 I 0.705
Sfrs5 Rattus norvegicus ENSRNOG00000005513 I 0.705
SRSF5 Echinops telfairi ENSETEG00000020396 I 0.705
SRSF5 Sus scrofa ENSSSCG00000002312 I 0.705
LOC100053264 Equus caballus ENSECAG00000026873 I 0.705
SRSF5 Cavia porcellus ENSCPOG00000005949 I 0.705
XP_002200515.1 Taeniopygia guttata ENSTGUG00000011492 I 0.705
SRSF5 Felis catus ENSFCAG00000008848 I 0.705