CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER1
(
Macaca mulatta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMMUG00000014897
T38922_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000019555
RRM
1
55
VSPQEVHDLLSDYELKYCFVDKYKGTAFVTLLNGEQAEAAINAFHQSCLRERELS
ENSMMUP00000019555
RRM
65
135
LCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLY
ENSMMUP00000019555
RRM
160
224
PPGFNDVDALCRALSAVHSPTFCQLACGQDGQLKGFAVLEYETAEMAEEAQQQADGLALGGSHLR
ENSMMUP00000019556
RRM
1
55
VSPQEVHDLLSDYELKYCFVDKYKGTAFVTLLNGEQAEAAINAFHQSCLRERELS
ENSMMUP00000019556
RRM
65
135
LCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLY
ENSMMUP00000019556
RRM
159
224
LPPGFNDVDALCRALSAVHSPTFCQLACGQDGQLKGFAVLEYETAEMAEEAQQQADGLALGGSHLR
Links
Other
RRM
family RBPs
Other
Macaca mulatta
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER1
Pan troglodytes
ENSPTRG00000010466
N
0.930
RAVER1
Homo sapiens
ENSG00000161847
N
0.930
RAVER1
Gorilla gorilla
ENSGGOG00000006015
N
0.925
ENSPPYG00000010514
Pongo pygmaeus
ENSPPYG00000010514
N
0.920
Ame_R009605
Ailuropoda melanoleuca
Ame_R009605
N
0.910
A4FUZ2_BOVIN
Bos taurus
ENSBTAG00000015721
N
0.888
Raver1
Dipodomys ordii
ENSDORG00000010106
N
0.888
RAVER1
Canis familiaris
ENSCAFG00000017861
N
0.883
RAVER1
Pteropus vampyrus
ENSPVAG00000003689
N
0.883
RAVER1
Cavia porcellus
ENSCPOG00000001008
N
0.883
RAVER1
Tursiops truncatus
ENSTTRG00000009552
N
0.883
RAVER1
Sus scrofa
ENSSSCG00000013650
N
0.883
RAVER1
Microcebus murinus
ENSMICG00000010326
N
0.878
Raver1
Rattus norvegicus
ENSRNOG00000020710
N
0.874
RAVER1
Loxodonta africana
ENSLAFG00000003664
N
0.874
RAVER1
Felis catus
ENSFCAG00000009435
N
0.869
Raver1
Mus musculus
ENSMUSG00000010205
N
0.868
RAVER1
Spermophilus tridecemlineatus
ENSSTOG00000003241
N
0.864
RAVER1
Oryctolagus cuniculus
ENSOCUG00000020918
N
0.859
RAVER1
Equus caballus
ENSECAG00000024966
N
0.840
RAVER1
Myotis lucifugus
ENSMLUG00000012328
N
0.792
RAVER1
Monodelphis domestica
ENSMODG00000005584
N
0.791
RAVER1
Macropus eugenii
ENSMEUG00000003281
N
0.777