CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM34
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000008436
T39112_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000010490
RRM
195
246
VFVGNLPVTCKKKELKSFFKEYGQIECVRFRSLIPAKSTLSKKIAAIKREVH
ENSMODP00000010490
RRM
236
282
KKIAAIKREVHPEQKSINGYVVFKEESAAEKALKRNGAQIAEGFPVR
ENSMODP00000010490
RRM
297
366
VFVGNLPYKIEEAAIQEHFSDCGSVLAVKIVRNKVTGVGKGCGYVLFENTDAVQLALRLNNSELMGRKLR
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Rbm34
Dipodomys ordii
ENSDORG00000006420
N
0.805
RBM34
Loxodonta africana
ENSLAFG00000014289
N
0.793
RBM34
Sus scrofa
ENSSSCG00000010157
N
0.787
Ame_R015227
Ailuropoda melanoleuca
Ame_R015227
N
0.787
RBM34
Homo sapiens
ENSG00000188739
N
0.787
RBM34
Felis catus
ENSFCAG00000001852
N
0.781
A8NJ74_BOVIN
Bos taurus
ENSBTAG00000000221
N
0.781
ARID4B
Macaca mulatta
ENSMMUG00000007141
N
0.781
RBM34
Gorilla gorilla
ENSGGOG00000007924
N
0.781
RBM34
Pan troglodytes
ENSPTRG00000032432
N
0.781
Rbm34
Mus musculus
ENSMUSG00000033931
N
0.775
A6MKB3_CALJA
Callithrix jacchus
ENSCJAG00000018125
N
0.769
LOC100146167
Equus caballus
ENSECAG00000013333
N
0.763
Rbm34
Rattus norvegicus
ENSRNOG00000020004
N
0.763
RBM34
Cavia porcellus
ENSCPOG00000015213
N
0.763
RBM34
Ornithorhynchus anatinus
ENSOANG00000001206
N
0.757
RBM34
Pteropus vampyrus
ENSPVAG00000015158
N
0.757
RBM34
Oryctolagus cuniculus
ENSOCUG00000009173
N
0.740
RBM34
Myotis lucifugus
ENSMLUG00000016224
N
0.728