CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM34
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000001206
T39438_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000001923
RRM
189
236
VFVGNLPVTCNKKKLKSIFKEYGPIESVRFRSVIPAEGISTKKLAAIK
ENSOANP00000001923
RRM
230
276
KKLAAIKRKFHPEQKNINAYVVFKKESSAAKALKRNGTQISDGFRIR
ENSOANP00000001923
RRM
291
360
VFVGNLAYKIEEASVQEHFSDCGQVVAVRIVRDGVTGAGKGFGYVLFANTDAVQLALKLNNSELMGRKLR
ENSOANP00000001924
RRM
188
235
VFVGNLPVTCNKKKLKSIFKEYGPIESVRFRSVIPAEGISTKKLAAIK
ENSOANP00000001924
RRM
229
275
KKLAAIKRKFHPEQKNINAYVVFKKESSAAKALKRNGTQISDGFRIR
ENSOANP00000001924
RRM
290
359
VFVGNLAYKIEEASVQEHFSDCGQVVAVRIVRDGVTGAGKGFGYVLFANTDAVQLALKLNNSELMGRKLR
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM34
Loxodonta africana
ENSLAFG00000014289
N
0.861
RBM34
Sus scrofa
ENSSSCG00000010157
N
0.842
Rbm34
Dipodomys ordii
ENSDORG00000006420
N
0.837
Ame_R015227
Ailuropoda melanoleuca
Ame_R015227
N
0.836
RBM34
Pteropus vampyrus
ENSPVAG00000015158
N
0.826
RBM34
Myotis lucifugus
ENSMLUG00000016224
N
0.824
ARID4B
Macaca mulatta
ENSMMUG00000007141
N
0.824
RBM34
Oryctolagus cuniculus
ENSOCUG00000009173
N
0.819
RBM34
Felis catus
ENSFCAG00000001852
N
0.818
LOC100146167
Equus caballus
ENSECAG00000013333
N
0.818
Rbm34
Mus musculus
ENSMUSG00000033931
N
0.818
RBM34
Pan troglodytes
ENSPTRG00000032432
N
0.818
RBM34
Homo sapiens
ENSG00000188739
N
0.812
RBM34
Cavia porcellus
ENSCPOG00000015213
N
0.812
A6MKB3_CALJA
Callithrix jacchus
ENSCJAG00000018125
N
0.812
RBM34
Gorilla gorilla
ENSGGOG00000007924
N
0.806
A8NJ74_BOVIN
Bos taurus
ENSBTAG00000000221
N
0.802
Rbm34
Rattus norvegicus
ENSRNOG00000020004
N
0.788
RBM34
Monodelphis domestica
ENSMODG00000008436
N
0.757
D3ZPK9_RAT
Rattus norvegicus
ENSRNOG00000023341
N
0.714