CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMODG00000015264
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000015264
T39173_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000019066
RRM
137
207
LGVFGLSLFTTEKDLREIFAKYGPISNVAVVYDQQSRRSRGFAFVYFESVDNAKEAREGADGLEVDGRRIR
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
82 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Tra2b
Mus musculus
ENSMUSG00000022858
N
0.789
TRA2B_BOVIN
Bos taurus
ENSBTAG00000001697
N
0.789
TRA2B
Canis familiaris
ENSCAFG00000013345
N
0.789
LOC100398526
Callithrix jacchus
ENSCJAG00000014710
N
0.789
Ame_R003489
Ailuropoda melanoleuca
Ame_R003489
N
0.789
tra2b
Xenopus tropicalis
ENSXETG00000007511
N
0.789
TRA2B
Tarsius syrichta
ENSTSYG00000000652
N
0.789
TRA2B
Tursiops truncatus
ENSTTRG00000008243
N
0.789
TRA2B
Vicugna pacos
ENSVPAG00000012015
N
0.789
TRA2B
Cavia porcellus
ENSCPOG00000006313
N
0.789
LOC100067887
Equus caballus
ENSECAG00000012701
N
0.789
TRA2B
Microcebus murinus
ENSMICG00000010611
N
0.789
Q8WMQ0_MACMU
Macaca mulatta
ENSMMUG00000001185
N
0.789
TRA2B
Monodelphis domestica
ENSMODG00000013248
N
0.789
TRA2B
Loxodonta africana
ENSLAFG00000017165
N
0.789
TRA2B
Gorilla gorilla
ENSGGOG00000009844
N
0.789
TRA2B
Erinaceus europaeus
ENSEEUG00000009822
N
0.789
TRA2B
Felis catus
ENSFCAG00000010526
N
0.789
TRA2B
Homo sapiens
ENSG00000136527
D
0.789
TRA2B
Sorex araneus
ENSSARG00000007638
N
0.789
TRA2B
Anolis carolinensis
ENSACAG00000008084
N
0.789
Tra2b
Rattus norvegicus
ENSRNOG00000001783
N
0.789
TRA2B
Pan troglodytes
ENSPTRG00000015707
N
0.789
TRA2B
Oryctolagus cuniculus
ENSOCUG00000008940
N
0.789
TRA2B
Pteropus vampyrus
ENSPVAG00000008615
N
0.789
ENSPPYG00000014374
Pongo pygmaeus
ENSPPYG00000014374
N
0.789
TRA2B
Ochotona princeps
ENSOPRG00000007990
N
0.789
TRA2B
Ornithorhynchus anatinus
ENSOANG00000013953
N
0.789
ENSDNOG00000011679
Dasypus novemcinctus
ENSDNOG00000011679
N
0.775
Q9DDU8_CHICK
Gallus gallus
ENSGALG00000006531
N
0.775
SFRS10
Taeniopygia guttata
ENSTGUG00000006742
N
0.775
AAH72952
Xenopus laevis
AAH72952
N
0.775
SFRS10
Taeniopygia guttata
ENSTGUG00000017023
N
0.775
ENSMGAG00000002853
Meleagris gallopavo
ENSMGAG00000002853
N
0.775
AAH44695
Xenopus laevis
AAH44695
N
0.761
AAI08874
Xenopus laevis
AAI08874
N
0.761
ENSGACG00000010109
Gasterosteus aculeatus
ENSGACG00000010109
N
0.746
TRA2B
Myotis lucifugus
ENSMLUG00000008670
N
0.746
Q6I6X8_ORYLA
Oryzias latipes
ENSORLG00000013780
N
0.746
tra2b
Danio rerio
ENSDARG00000002168
N
0.746
D3ZLN0_RAT
Rattus norvegicus
ENSRNOG00000002201
N
0.746
ENSTNIG00000017210
Tetraodon nigroviridis
ENSTNIG00000017210
N
0.732
ENSMODG00000009767
Monodelphis domestica
ENSMODG00000009767
N
0.732
ENSTRUG00000015168
Takifugu rubripes
ENSTRUG00000015168
N
0.732
TRA2A
Gorilla gorilla
ENSGGOG00000009053
N
0.718
TRA2A
Loxodonta africana
ENSLAFG00000006598
N
0.718
TRA2A
Oryctolagus cuniculus
ENSOCUG00000024139
N
0.718
TRA2A
Homo sapiens
ENSG00000164548
N
0.718
TRA2A
Otolemur garnettii
ENSOGAG00000009733
N
0.718
TRA2A
Macropus eugenii
ENSMEUG00000001202
N
0.718
TRA2B
Tupaia belangeri
ENSTBEG00000015927
N
0.718
Q8WMQ1_MACMU
Macaca mulatta
ENSMMUG00000006286
N
0.718
TRA2A
Monodelphis domestica
ENSMODG00000000807
N
0.718
Tra2a
Mus musculus
ENSMUSG00000029817
N
0.718
TRA2A
Sus scrofa
ENSSSCG00000015387
N
0.718
TRA2A
Myotis lucifugus
ENSMLUG00000013972
N
0.718
TRA2A
Ornithorhynchus anatinus
ENSOANG00000014202
N
0.718
TRA2A
Tupaia belangeri
ENSTBEG00000013773
N
0.718
Ame_R009558
Ailuropoda melanoleuca
Ame_R009558
N
0.718
TRA2A
Ochotona princeps
ENSOPRG00000007606
N
0.718
Q6I6X6_ORYLA
Oryzias latipes
ENSORLG00000016554
N
0.718
TRA2A
Cavia porcellus
ENSCPOG00000010739
N
0.718
TRA2A
Echinops telfairi
ENSETEG00000007250
N
0.718
TRA2A
Canis familiaris
ENSCAFG00000002788
N
0.718
TRA2A
Procavia capensis
ENSPCAG00000004148
N
0.718
TRA2A
Choloepus hoffmanni
ENSCHOG00000001130
N
0.718
TRA2A
Callithrix jacchus
ENSCJAG00000001509
N
0.718
Tra2a
Rattus norvegicus
ENSRNOG00000009156
N
0.718
Q2KJ71_BOVIN
Bos taurus
ENSBTAG00000012622
N
0.718
TRA2A
Anolis carolinensis
ENSACAG00000013502
N
0.718
TRA2A
Tursiops truncatus
ENSTTRG00000008922
N
0.718
TRA2A
Erinaceus europaeus
ENSEEUG00000015674
N
0.718
LOC100068009
Equus caballus
ENSECAG00000011508
N
0.718
Tra2a
Dipodomys ordii
ENSDORG00000009361
N
0.718
TRA2A
Pteropus vampyrus
ENSPVAG00000011298
N
0.718
ENSPPYG00000017728
Pongo pygmaeus
ENSPPYG00000017728
N
0.718
TRA2A
Pan troglodytes
ENSPTRG00000018988
N
0.718
TRA2A
Taeniopygia guttata
ENSTGUG00000002795
N
0.704
TRA2B
Gasterosteus aculeatus
ENSGACG00000005986
N
0.704
Q5ZLY6_CHICK
Gallus gallus
ENSGALG00000010973
N
0.704
tra2a
Danio rerio
ENSDARG00000007863
N
0.704
TRA2A
Meleagris gallopavo
ENSMGAG00000010514
N
0.704