tra2b (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000007511 T42851_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000016359 RRM 127 197

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

96 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH72952 Xenopus laevis AAH72952 N 0.986
Q8WMQ0_MACMU Macaca mulatta ENSMMUG00000001185 N 0.972
TRA2B Monodelphis domestica ENSMODG00000013248 N 0.972
Tra2b Mus musculus ENSMUSG00000022858 N 0.972
TRA2B Ornithorhynchus anatinus ENSOANG00000013953 N 0.972
TRA2B Loxodonta africana ENSLAFG00000017165 N 0.972
TRA2B Erinaceus europaeus ENSEEUG00000009822 N 0.972
TRA2B Felis catus ENSFCAG00000010526 N 0.972
TRA2B Homo sapiens ENSG00000136527 D 0.972
TRA2B Gorilla gorilla ENSGGOG00000009844 N 0.972
TRA2B Oryctolagus cuniculus ENSOCUG00000008940 N 0.972
TRA2B Ochotona princeps ENSOPRG00000007990 N 0.972
TRA2B Tarsius syrichta ENSTSYG00000000652 N 0.972
TRA2B Tursiops truncatus ENSTTRG00000008243 N 0.972
TRA2B Vicugna pacos ENSVPAG00000012015 N 0.972
TRA2B Sorex araneus ENSSARG00000007638 N 0.972
Tra2b Rattus norvegicus ENSRNOG00000001783 N 0.972
ENSPPYG00000014374 Pongo pygmaeus ENSPPYG00000014374 N 0.972
TRA2B Pan troglodytes ENSPTRG00000015707 N 0.972
TRA2B Pteropus vampyrus ENSPVAG00000008615 N 0.972
LOC100067887 Equus caballus ENSECAG00000012701 N 0.972
TRA2B Microcebus murinus ENSMICG00000010611 N 0.972
AAI08874 Xenopus laevis AAI08874 N 0.972
AAH44695 Xenopus laevis AAH44695 N 0.972
TRA2B Anolis carolinensis ENSACAG00000008084 N 0.972
TRA2B Canis familiaris ENSCAFG00000013345 N 0.972
TRA2B_BOVIN Bos taurus ENSBTAG00000001697 N 0.972
TRA2B Cavia porcellus ENSCPOG00000006313 N 0.972
LOC100398526 Callithrix jacchus ENSCJAG00000014710 N 0.972
Ame_R003489 Ailuropoda melanoleuca Ame_R003489 N 0.972
SFRS10 Taeniopygia guttata ENSTGUG00000017023 N 0.958
ENSMGAG00000002853 Meleagris gallopavo ENSMGAG00000002853 N 0.958
ENSDNOG00000011679 Dasypus novemcinctus ENSDNOG00000011679 N 0.958
Q9DDU8_CHICK Gallus gallus ENSGALG00000006531 N 0.958
SFRS10 Taeniopygia guttata ENSTGUG00000006742 N 0.958
tra2b Danio rerio ENSDARG00000002168 N 0.915
D3ZLN0_RAT Rattus norvegicus ENSRNOG00000002201 N 0.915
ENSGACG00000010109 Gasterosteus aculeatus ENSGACG00000010109 N 0.901
ENSMODG00000009767 Monodelphis domestica ENSMODG00000009767 N 0.901
TRA2B Gasterosteus aculeatus ENSGACG00000005986 N 0.887
Q6I6X6_ORYLA Oryzias latipes ENSORLG00000016554 N 0.887
ENSTNIG00000017210 Tetraodon nigroviridis ENSTNIG00000017210 N 0.887
Q6I6X8_ORYLA Oryzias latipes ENSORLG00000013780 N 0.887
TRA2B Tupaia belangeri ENSTBEG00000015927 N 0.873
ENSTRUG00000015168 Takifugu rubripes ENSTRUG00000015168 N 0.873
TRA2B Myotis lucifugus ENSMLUG00000008670 N 0.859
ENSDNOG00000018192 Dasypus novemcinctus ENSDNOG00000018192 N 0.859
TRA2A Oryctolagus cuniculus ENSOCUG00000024139 N 0.817
TRA2A Otolemur garnettii ENSOGAG00000009733 N 0.817
TRA2A Ochotona princeps ENSOPRG00000007606 N 0.817
TRA2A Pan troglodytes ENSPTRG00000018988 N 0.817
Tra2a Rattus norvegicus ENSRNOG00000009156 N 0.817
TRA2A Sus scrofa ENSSSCG00000015387 N 0.817
TRA2A Tupaia belangeri ENSTBEG00000013773 N 0.817
TRA2A Ornithorhynchus anatinus ENSOANG00000014202 N 0.817
Tra2b Rattus norvegicus ENSRNOG00000005867 N 0.817
Ame_R009558 Ailuropoda melanoleuca Ame_R009558 N 0.817
ENSPPYG00000017728 Pongo pygmaeus ENSPPYG00000017728 N 0.817
TRA2A Pteropus vampyrus ENSPVAG00000011298 N 0.817
TRA2A Procavia capensis ENSPCAG00000004148 N 0.817
Tra2a Mus musculus ENSMUSG00000029817 N 0.817
TRA2A Homo sapiens ENSG00000164548 N 0.817
TRA2A Gorilla gorilla ENSGGOG00000009053 N 0.817
Q2KJ71_BOVIN Bos taurus ENSBTAG00000012622 N 0.817
TRA2A Callithrix jacchus ENSCJAG00000001509 N 0.817
TRA2A Cavia porcellus ENSCPOG00000010739 N 0.817
TRA2A Echinops telfairi ENSETEG00000007250 N 0.817
Tra2a Dipodomys ordii ENSDORG00000009361 N 0.817
LOC100068009 Equus caballus ENSECAG00000011508 N 0.817
TRA2A Erinaceus europaeus ENSEEUG00000015674 N 0.817
TRA2A Macropus eugenii ENSMEUG00000001202 N 0.817
TRA2A Loxodonta africana ENSLAFG00000006598 N 0.817
TRA2A Myotis lucifugus ENSMLUG00000013972 N 0.817
Q8WMQ1_MACMU Macaca mulatta ENSMMUG00000006286 N 0.817
TRA2A Monodelphis domestica ENSMODG00000000807 N 0.817
TRA2A Canis familiaris ENSCAFG00000002788 N 0.817
TRA2A Choloepus hoffmanni ENSCHOG00000001130 N 0.817
TRA2A Tursiops truncatus ENSTTRG00000008922 N 0.803
tra2a Danio rerio ENSDARG00000007863 N 0.803
TRA2A Anolis carolinensis ENSACAG00000013502 N 0.803
TRA2A Meleagris gallopavo ENSMGAG00000010514 N 0.789
TRA2A Taeniopygia guttata ENSTGUG00000002795 N 0.789
TRA2B Spermophilus tridecemlineatus ENSSTOG00000006720 N 0.789
ISCW010309 Ixodes scapularis ISCW010309 N 0.789
TRA2A Gasterosteus aculeatus ENSGACG00000006878 N 0.789
ENSMODG00000015264 Monodelphis domestica ENSMODG00000015264 N 0.789
Q5ZLY6_CHICK Gallus gallus ENSGALG00000010973 N 0.789
tra2a Xenopus tropicalis ENSXETG00000007397 N 0.761
TRA2A Spermophilus tridecemlineatus ENSSTOG00000012073 N 0.761
TRA2B Macropus eugenii ENSMEUG00000013768 N 0.746
ENSMLUG00000005781 Myotis lucifugus ENSMLUG00000005781 N 0.746
ENSDORG00000004468 Dipodomys ordii ENSDORG00000004468 N 0.746
TRA2B Otolemur garnettii ENSOGAG00000005386 N 0.746
e_gw.35.152.1 Nematostella vectensis e_gw.35.152.1 N 0.718
AAH73641 Xenopus laevis AAH73641 N 0.718
AAH44990 Xenopus laevis AAH44990 N 0.718