AAI08874 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAI08874 T59614_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAI08874 RRM 124 194

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

96 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44695 Xenopus laevis AAH44695 N 1.000
AAH72952 Xenopus laevis AAH72952 N 0.986
tra2b Xenopus tropicalis ENSXETG00000007511 N 0.972
TRA2B Anolis carolinensis ENSACAG00000008084 N 0.944
Tra2b Mus musculus ENSMUSG00000022858 N 0.944
TRA2B Ornithorhynchus anatinus ENSOANG00000013953 N 0.944
TRA2B Gorilla gorilla ENSGGOG00000009844 N 0.944
TRA2B Monodelphis domestica ENSMODG00000013248 N 0.944
TRA2B Microcebus murinus ENSMICG00000010611 N 0.944
TRA2B Oryctolagus cuniculus ENSOCUG00000008940 N 0.944
TRA2B Loxodonta africana ENSLAFG00000017165 N 0.944
Ame_R003489 Ailuropoda melanoleuca Ame_R003489 N 0.944
TRA2B Sorex araneus ENSSARG00000007638 N 0.944
TRA2B Tarsius syrichta ENSTSYG00000000652 N 0.944
TRA2B Tursiops truncatus ENSTTRG00000008243 N 0.944
TRA2B Vicugna pacos ENSVPAG00000012015 N 0.944
Tra2b Rattus norvegicus ENSRNOG00000001783 N 0.944
TRA2B Pteropus vampyrus ENSPVAG00000008615 N 0.944
TRA2B Ochotona princeps ENSOPRG00000007990 N 0.944
ENSPPYG00000014374 Pongo pygmaeus ENSPPYG00000014374 N 0.944
TRA2B Pan troglodytes ENSPTRG00000015707 N 0.944
TRA2B Homo sapiens ENSG00000136527 D 0.944
Q8WMQ0_MACMU Macaca mulatta ENSMMUG00000001185 N 0.944
LOC100398526 Callithrix jacchus ENSCJAG00000014710 N 0.944
TRA2B Erinaceus europaeus ENSEEUG00000009822 N 0.944
TRA2B Felis catus ENSFCAG00000010526 N 0.944
LOC100067887 Equus caballus ENSECAG00000012701 N 0.944
TRA2B Canis familiaris ENSCAFG00000013345 N 0.944
TRA2B Cavia porcellus ENSCPOG00000006313 N 0.944
TRA2B_BOVIN Bos taurus ENSBTAG00000001697 N 0.944
ENSDNOG00000011679 Dasypus novemcinctus ENSDNOG00000011679 N 0.930
Q9DDU8_CHICK Gallus gallus ENSGALG00000006531 N 0.930
ENSMGAG00000002853 Meleagris gallopavo ENSMGAG00000002853 N 0.930
SFRS10 Taeniopygia guttata ENSTGUG00000006742 N 0.930
SFRS10 Taeniopygia guttata ENSTGUG00000017023 N 0.930
tra2b Danio rerio ENSDARG00000002168 N 0.915
ENSGACG00000010109 Gasterosteus aculeatus ENSGACG00000010109 N 0.901
ENSTNIG00000017210 Tetraodon nigroviridis ENSTNIG00000017210 N 0.887
D3ZLN0_RAT Rattus norvegicus ENSRNOG00000002201 N 0.887
Q6I6X6_ORYLA Oryzias latipes ENSORLG00000016554 N 0.887
Q6I6X8_ORYLA Oryzias latipes ENSORLG00000013780 N 0.887
TRA2B Gasterosteus aculeatus ENSGACG00000005986 N 0.887
ENSMODG00000009767 Monodelphis domestica ENSMODG00000009767 N 0.873
ENSTRUG00000015168 Takifugu rubripes ENSTRUG00000015168 N 0.873
TRA2B Myotis lucifugus ENSMLUG00000008670 N 0.859
ENSDNOG00000018192 Dasypus novemcinctus ENSDNOG00000018192 N 0.845
TRA2B Tupaia belangeri ENSTBEG00000015927 N 0.845
TRA2A Sus scrofa ENSSSCG00000015387 N 0.817
TRA2A Tupaia belangeri ENSTBEG00000013773 N 0.817
TRA2A Procavia capensis ENSPCAG00000004148 N 0.817
ENSPPYG00000017728 Pongo pygmaeus ENSPPYG00000017728 N 0.817
Q2KJ71_BOVIN Bos taurus ENSBTAG00000012622 N 0.817
TRA2A Callithrix jacchus ENSCJAG00000001509 N 0.817
Tra2a Rattus norvegicus ENSRNOG00000009156 N 0.817
TRA2A Pteropus vampyrus ENSPVAG00000011298 N 0.817
TRA2A Choloepus hoffmanni ENSCHOG00000001130 N 0.817
TRA2A Pan troglodytes ENSPTRG00000018988 N 0.817
Tra2b Rattus norvegicus ENSRNOG00000005867 N 0.817
TRA2A Canis familiaris ENSCAFG00000002788 N 0.817
TRA2A Cavia porcellus ENSCPOG00000010739 N 0.817
TRA2A Macropus eugenii ENSMEUG00000001202 N 0.817
TRA2A Ochotona princeps ENSOPRG00000007606 N 0.817
Ame_R009558 Ailuropoda melanoleuca Ame_R009558 N 0.817
TRA2A Erinaceus europaeus ENSEEUG00000015674 N 0.817
TRA2A Homo sapiens ENSG00000164548 N 0.817
TRA2A Gorilla gorilla ENSGGOG00000009053 N 0.817
TRA2A Echinops telfairi ENSETEG00000007250 N 0.817
TRA2A Loxodonta africana ENSLAFG00000006598 N 0.817
LOC100068009 Equus caballus ENSECAG00000011508 N 0.817
TRA2A Myotis lucifugus ENSMLUG00000013972 N 0.817
TRA2A Ornithorhynchus anatinus ENSOANG00000014202 N 0.817
TRA2A Oryctolagus cuniculus ENSOCUG00000024139 N 0.817
TRA2A Otolemur garnettii ENSOGAG00000009733 N 0.817
Tra2a Mus musculus ENSMUSG00000029817 N 0.817
Tra2a Dipodomys ordii ENSDORG00000009361 N 0.817
TRA2A Monodelphis domestica ENSMODG00000000807 N 0.817
Q8WMQ1_MACMU Macaca mulatta ENSMMUG00000006286 N 0.817
TRA2A Anolis carolinensis ENSACAG00000013502 N 0.803
tra2a Danio rerio ENSDARG00000007863 N 0.803
TRA2A Tursiops truncatus ENSTTRG00000008922 N 0.803
TRA2A Gasterosteus aculeatus ENSGACG00000006878 N 0.789
TRA2A Meleagris gallopavo ENSMGAG00000010514 N 0.789
ISCW010309 Ixodes scapularis ISCW010309 N 0.789
TRA2A Taeniopygia guttata ENSTGUG00000002795 N 0.789
Q5ZLY6_CHICK Gallus gallus ENSGALG00000010973 N 0.789
TRA2B Spermophilus tridecemlineatus ENSSTOG00000006720 N 0.775
ENSMODG00000015264 Monodelphis domestica ENSMODG00000015264 N 0.761
TRA2A Spermophilus tridecemlineatus ENSSTOG00000012073 N 0.761
tra2a Xenopus tropicalis ENSXETG00000007397 N 0.761
AAH73641 Xenopus laevis AAH73641 N 0.746
TRA2B Macropus eugenii ENSMEUG00000013768 N 0.732
ENSDORG00000004468 Dipodomys ordii ENSDORG00000004468 N 0.732
ENSMLUG00000005781 Myotis lucifugus ENSMLUG00000005781 N 0.732
TRA2B Otolemur garnettii ENSOGAG00000005386 N 0.732
AAH44990 Xenopus laevis AAH44990 N 0.718
e_gw.35.152.1 Nematostella vectensis e_gw.35.152.1 N 0.704