CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MYEF2
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000007375
T39492_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000011736
RRM
49
119
VFISNIPYDMKWQAIKDLMREKVGEVAYVELFKDAEGQSRGCGVVEFRDGEFVKKALETMNKYDLSGRPLN
ENSOANP00000011736
RRM
182
251
VFVANLDFKVGWKKLKEVFSIAGSVKRADVKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMH
ENSOANP00000011736
RRM
461
483
IFVRNLPFDLTWQKLKEKFSQCG
ENSOANP00000011737
RRM
48
118
VFISNIPYDMKWQAIKDLMREKVGEVAYVELFKDAEGQSRGCGVVEFRDGEFVKKALETMNKYDLSGRPLN
ENSOANP00000011737
RRM
181
250
VFVANLDFKVGWKKLKEVFSIAGSVKRADVKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMH
ENSOANP00000011737
RRM
478
500
IFVRNLPFDLTWQKLKEKFSQCG
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Myef2
Mus musculus
ENSMUSG00000027201
N
0.951
MYEF2
Pteropus vampyrus
ENSPVAG00000004102
N
0.951
MYEF2
Loxodonta africana
ENSLAFG00000012990
N
0.929
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.924
Gm9833
Mus musculus
ENSMUSG00000049230
N
0.872
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.748
MYEF2
Homo sapiens
ENSG00000104177
N
0.748
MYEF2
Macaca mulatta
ENSMMUG00000018834
N
0.748
A6QQP0_BOVIN
Bos taurus
ENSBTAG00000008771
N
0.748
MYEF2
Meleagris gallopavo
ENSMGAG00000006915
N
0.748
Q5ZHY2_CHICK
Gallus gallus
ENSGALG00000004905
N
0.748
MYEF2
Canis familiaris
ENSCAFG00000014008
N
0.748
ENSPPYG00000006452
Pongo pygmaeus
ENSPPYG00000006452
N
0.748
MYEF2
Tursiops truncatus
ENSTTRG00000008076
N
0.748
MYEF2
Pan troglodytes
ENSPTRG00000007042
N
0.748
MYEF2
Procavia capensis
ENSPCAG00000016660
N
0.748
MYEF2
Vicugna pacos
ENSVPAG00000004721
N
0.748
Ame_R005511
Ailuropoda melanoleuca
Ame_R005511
N
0.748
MYEF2
Oryctolagus cuniculus
ENSOCUG00000013043
N
0.748
MYEF2
Gorilla gorilla
ENSGGOG00000014968
N
0.743
MYEF2
Taeniopygia guttata
ENSTGUG00000007130
N
0.743
ENSDORG00000015835
Dipodomys ordii
ENSDORG00000015835
N
0.743
MYEF2
Callithrix jacchus
ENSCJAG00000001875
N
0.743
MYEF2
Sus scrofa
ENSSSCG00000004661
N
0.738
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.732
MYEF2
Anolis carolinensis
ENSACAG00000004806
N
0.714
MYEF2
Cavia porcellus
ENSCPOG00000010584
N
0.706
myef2
Xenopus tropicalis
ENSXETG00000018412
N
0.705
ENSMODG00000003473
Monodelphis domestica
ENSMODG00000003473
N
0.701
MYEF2
Gasterosteus aculeatus
ENSGACG00000016759
N
0.700