CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MYEF2
(
Pteropus vampyrus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPVAG00000004102
T40859_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000003883
RRM
102
172
VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLN
ENSPVAP00000003883
RRM
235
304
IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMH
ENSPVAP00000003883
RRM
525
546
IFVRNLPFDLTWQKLKEKFSQC
Links
Other
RRM
family RBPs
Other
Pteropus vampyrus
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Myef2
Mus musculus
ENSMUSG00000027201
N
1.000
MYEF2
Loxodonta africana
ENSLAFG00000012990
N
0.964
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.959
MYEF2
Ornithorhynchus anatinus
ENSOANG00000007375
N
0.951
Gm9833
Mus musculus
ENSMUSG00000049230
N
0.906
MYEF2
Pan troglodytes
ENSPTRG00000007042
N
0.776
Q5ZHY2_CHICK
Gallus gallus
ENSGALG00000004905
N
0.776
MYEF2
Homo sapiens
ENSG00000104177
N
0.776
MYEF2
Meleagris gallopavo
ENSMGAG00000006915
N
0.776
MYEF2
Macaca mulatta
ENSMMUG00000018834
N
0.776
MYEF2
Procavia capensis
ENSPCAG00000016660
N
0.776
ENSPPYG00000006452
Pongo pygmaeus
ENSPPYG00000006452
N
0.776
MYEF2
Oryctolagus cuniculus
ENSOCUG00000013043
N
0.776
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.776
MYEF2
Vicugna pacos
ENSVPAG00000004721
N
0.776
MYEF2
Tursiops truncatus
ENSTTRG00000008076
N
0.776
Ame_R005511
Ailuropoda melanoleuca
Ame_R005511
N
0.776
MYEF2
Canis familiaris
ENSCAFG00000014008
N
0.776
A6QQP0_BOVIN
Bos taurus
ENSBTAG00000008771
N
0.776
MYEF2
Taeniopygia guttata
ENSTGUG00000007130
N
0.771
MYEF2
Gorilla gorilla
ENSGGOG00000014968
N
0.771
ENSDORG00000015835
Dipodomys ordii
ENSDORG00000015835
N
0.771
MYEF2
Callithrix jacchus
ENSCJAG00000001875
N
0.771
MYEF2
Sus scrofa
ENSSSCG00000004661
N
0.767
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.760
ENSMODG00000003473
Monodelphis domestica
ENSMODG00000003473
N
0.736
MYEF2
Cavia porcellus
ENSCPOG00000010584
N
0.735
MYEF2
Anolis carolinensis
ENSACAG00000004806
N
0.733
MYEF2
Tarsius syrichta
ENSTSYG00000010575
N
0.710
AAI08588
Xenopus laevis
AAI08588
N
0.710
myef2
Xenopus tropicalis
ENSXETG00000018412
N
0.710
MYEF2
Gasterosteus aculeatus
ENSGACG00000016759
N
0.705