CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MYEF2
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000004806
T34630_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000004760
RRM
25
95
VFISNIPYDMKWQSIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFRDEEFVRKAMDTMNKYDLNGRPLN
ENSACAP00000004760
RRM
158
227
IFVANLDFKVGWKKLKEVFLIAGTVKRADIKEDKDGKSRGMGTVTFEQPIEAVQAISMFNGQFLFDRPMH
ENSACAP00000004760
RRM
450
518
IFVRNLPFDLTWQKLKEKFNQCGHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRVMNGIKISGREID
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
75 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MYEF2
Taeniopygia guttata
ENSTGUG00000007130
N
0.957
MYEF2
Macaca mulatta
ENSMMUG00000018834
N
0.952
MYEF2
Pan troglodytes
ENSPTRG00000007042
N
0.952
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.952
MYEF2
Tursiops truncatus
ENSTTRG00000008076
N
0.952
MYEF2
Homo sapiens
ENSG00000104177
N
0.952
MYEF2
Meleagris gallopavo
ENSMGAG00000006915
N
0.952
Q5ZHY2_CHICK
Gallus gallus
ENSGALG00000004905
N
0.952
MYEF2
Vicugna pacos
ENSVPAG00000004721
N
0.952
MYEF2
Procavia capensis
ENSPCAG00000016660
N
0.952
MYEF2
Canis familiaris
ENSCAFG00000014008
N
0.952
Ame_R005511
Ailuropoda melanoleuca
Ame_R005511
N
0.952
ENSPPYG00000006452
Pongo pygmaeus
ENSPPYG00000006452
N
0.952
A6QQP0_BOVIN
Bos taurus
ENSBTAG00000008771
N
0.952
MYEF2
Oryctolagus cuniculus
ENSOCUG00000013043
N
0.952
MYEF2
Loxodonta africana
ENSLAFG00000012990
N
0.948
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.948
MYEF2
Gorilla gorilla
ENSGGOG00000014968
N
0.948
MYEF2
Callithrix jacchus
ENSCJAG00000001875
N
0.948
ENSDORG00000015835
Dipodomys ordii
ENSDORG00000015835
N
0.948
Myef2
Mus musculus
ENSMUSG00000027201
N
0.943
MYEF2
Sus scrofa
ENSSSCG00000004661
N
0.943
myef2
Xenopus tropicalis
ENSXETG00000018412
N
0.919
AAI08588
Xenopus laevis
AAI08588
N
0.914
MYEF2
Cavia porcellus
ENSCPOG00000010584
N
0.905
MYEF2
Tarsius syrichta
ENSTSYG00000010575
N
0.886
MYEF2
Oryzias latipes
ENSORLG00000002730
N
0.876
MYEF2
Monodelphis domestica
ENSMODG00000002744
N
0.871
MYEF2
Gasterosteus aculeatus
ENSGACG00000016759
N
0.871
MYEF2
Takifugu rubripes
ENSTRUG00000016967
N
0.869
MYEF2
Tetraodon nigroviridis
ENSTNIG00000009526
N
0.867
myef2
Danio rerio
ENSDARG00000059398
N
0.852
MYEF2
Otolemur garnettii
ENSOGAG00000010907
N
0.852
MYEF2
Sorex araneus
ENSSARG00000003264
N
0.838
MYEF2
Ochotona princeps
ENSOPRG00000003919
N
0.833
XM_001365870.1
Monodelphis domestica
ENSMODG00000003801
N
0.763
Ame_R017061
Ailuropoda melanoleuca
Ame_R017061
N
0.758
HNRNPM
Pan troglodytes
ENSPTRG00000010424
N
0.758
HNRNPM
Sus scrofa
ENSSSCG00000013602
N
0.758
Hnrpm
Rattus norvegicus
ENSRNOG00000007921
N
0.758
HNRNPM
Tursiops truncatus
ENSTTRG00000009769
N
0.758
ENSPPYG00000009506
Pongo pygmaeus
ENSPPYG00000009506
N
0.758
ENSOCUG00000000552
Oryctolagus cuniculus
ENSOCUG00000000552
N
0.758
HNRNPM
Equus caballus
ENSECAG00000023868
N
0.758
HNRNPM
Cavia porcellus
ENSCPOG00000015182
N
0.758
HNRNPM
Echinops telfairi
ENSETEG00000019712
N
0.758
HNRNPM
Homo sapiens
ENSG00000099783
N
0.758
HNRNPM
Loxodonta africana
ENSLAFG00000013603
N
0.758
HNRNPM
Gorilla gorilla
ENSGGOG00000003498
N
0.758
HNRNPM
Macaca mulatta
ENSMMUG00000018806
N
0.758
ENSOCUG00000024611
Oryctolagus cuniculus
ENSOCUG00000024611
N
0.758
Q3SYX2_BOVIN
Bos taurus
ENSBTAG00000021039
N
0.758
HNRNPM
Choloepus hoffmanni
ENSCHOG00000013627
N
0.758
HNRNPM
Canis familiaris
ENSCAFG00000018524
N
0.758
HNRNPM
Callithrix jacchus
ENSCJAG00000010802
N
0.754
HNRNPM
Myotis lucifugus
ENSMLUG00000006696
N
0.754
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.754
Q5ZL80_CHICK
Gallus gallus
ENSGALG00000000377
N
0.750
HNRNPM
Procavia capensis
ENSPCAG00000009678
N
0.749
MYEF2
Spermophilus tridecemlineatus
ENSSTOG00000007740
N
0.748
Gm9833
Mus musculus
ENSMUSG00000049230
N
0.748
HNRNPM
Tupaia belangeri
ENSTBEG00000008718
N
0.744
HNRNPM
Gasterosteus aculeatus
ENSGACG00000010265
N
0.743
HNRNPM
Oryzias latipes
ENSORLG00000005400
N
0.743
HNRNPM
Meleagris gallopavo
ENSMGAG00000000700
N
0.741
HNRNPM
Microcebus murinus
ENSMICG00000002532
N
0.739
MYEF2
Myotis lucifugus
ENSMLUG00000006781
N
0.738
MYEF2
Pteropus vampyrus
ENSPVAG00000004102
N
0.733
HNRNPM
Sorex araneus
ENSSARG00000000267
N
0.726
AAI34826
Xenopus laevis
AAI34826
N
0.725
HNRNPM
Takifugu rubripes
ENSTRUG00000013783
N
0.724
HNRNPM
Tetraodon nigroviridis
ENSTNIG00000015530
N
0.719
MYEF2
Ornithorhynchus anatinus
ENSOANG00000007375
N
0.714
HNRNPM
Spermophilus tridecemlineatus
ENSSTOG00000008112
N
0.710
HNRNPM
Ochotona princeps
ENSOPRG00000001943
N
0.708