CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPA2B1
(
Ochotona princeps
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOPRG00000011698
T40019_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
HNRNPA2B1
M024_0.6
Homo sapiens
DUAGGGW
RNAcompete
Ray et al.(2013)
RNCMPT00024
0.722
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000010664
RRM
94
138
XXXXVMRDPGSKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVE
ENSOPRP00000010664
RRM
160
229
LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE
Links
Other
RRM
family RBPs
Other
Ochotona princeps
RBPs
45 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPA2B1
Loxodonta africana
ENSLAFG00000006902
I
0.786
HNRNPA2B1
Canis familiaris
ENSCAFG00000002885
I
0.786
ENSCJAG00000021872
Callithrix jacchus
ENSCJAG00000021872
I
0.786
Ame_R000626
Ailuropoda melanoleuca
Ame_R000626
I
0.786
HNRNPA2B1
Gorilla gorilla
ENSGGOG00000017072
I
0.786
ROA2_BOVIN
Bos taurus
ENSBTAG00000005726
I
0.786
Hnrnpa2b1
Dipodomys ordii
ENSDORG00000005482
I
0.786
LOC100068539
Equus caballus
ENSECAG00000000782
I
0.786
HNRNPA2B1
Echinops telfairi
ENSETEG00000018577
I
0.786
HNRNPA2B1
Homo sapiens
ENSG00000122566
D
0.786
HNRNPA2B1
Myotis lucifugus
ENSMLUG00000007578
I
0.786
HNRNPA2B1
Tursiops truncatus
ENSTTRG00000000709
I
0.786
HNRNPA2B1
Oryctolagus cuniculus
ENSOCUG00000026859
I
0.786
Hnrnpa2b1
Rattus norvegicus
ENSRNOG00000011175
I
0.786
HNRNPA2B1
Pteropus vampyrus
ENSPVAG00000006296
I
0.786
HNRNPA2B1
Pan troglodytes
ENSPTRG00000019002
I
0.786
LOC100401647
Callithrix jacchus
ENSCJAG00000007908
I
0.786
Hnrnpa2b1
Mus musculus
ENSMUSG00000004980
I
0.786
HNRNPA2B1
Macaca mulatta
ENSMMUG00000003619
I
0.786
HNRNPA2B1
Dasypus novemcinctus
ENSDNOG00000012928
I
0.786
ENSSTOG00000006202
Spermophilus tridecemlineatus
ENSSTOG00000006202
I
0.786
ENSPPYG00000017715
Pongo pygmaeus
ENSPPYG00000017715
I
0.786
HNRNPA2B1
Meleagris gallopavo
ENSMGAG00000010635
I
0.779
HNRNPA2B1
Ornithorhynchus anatinus
ENSOANG00000009159
I
0.779
HNRNPA2B1
Monodelphis domestica
ENSMODG00000000603
I
0.779
ENSMEUG00000001084
Macropus eugenii
ENSMEUG00000001084
I
0.779
Q5ZME1_CHICK
Gallus gallus
ENSGALG00000011036
I
0.779
HNRNPA2B1
Anolis carolinensis
ENSACAG00000012992
I
0.779
HNRNPA2B1
Choloepus hoffmanni
ENSCHOG00000013832
I
0.779
HNRNPA2B1
Taeniopygia guttata
ENSTGUG00000002869
I
0.779
ENSMEUG00000014479
Macropus eugenii
ENSMEUG00000014479
I
0.771
ENSSSCG00000015836
Sus scrofa
ENSSSCG00000015836
I
0.771
ENSSTOG00000009092
Spermophilus tridecemlineatus
ENSSTOG00000009092
I
0.764
D4A1X0_RAT
Rattus norvegicus
ENSRNOG00000021254
I
0.754
hnrnpa2b1
Xenopus tropicalis
ENSXETG00000012170
I
0.736
AAA49948
Xenopus laevis
AAA49948
I
0.729
AAH46692
Xenopus laevis
AAH46692
I
0.729
P51989
Xenopus laevis
P51989
I
0.729
CBU92450
Xenopus laevis
CBU92450
I
0.729
CBF67577
Xenopus laevis
CBF67577
I
0.729
ENSSSCG00000013607
Sus scrofa
ENSSSCG00000013607
I
0.729
AAB59951
Xenopus laevis
AAB59951
I
0.714
P51990
Xenopus laevis
P51990
I
0.714
AAI06633
Xenopus laevis
AAI06633
I
0.714
AAH43750
Xenopus laevis
AAH43750
I
0.714