CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSTBEG00000013201
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000013201
T41786_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000011430
RRM
56
124
LLLSNLHPSVSDRDIQMLFSEFGALQKQAAVHYDGSGRSLGTATVHFQRKADALKALREYNGVPLDGNG
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
57 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSTBEG00000014875
Tupaia belangeri
ENSTBEG00000014875
N
0.754
ENSMLUG00000014480
Myotis lucifugus
ENSMLUG00000014480
N
0.754
ENSMLUG00000007634
Myotis lucifugus
ENSMLUG00000007634
N
0.739
ENSMLUG00000008923
Myotis lucifugus
ENSMLUG00000008923
N
0.739
ENSMLUG00000011212
Myotis lucifugus
ENSMLUG00000011212
N
0.739
ENSMLUG00000002669
Myotis lucifugus
ENSMLUG00000002669
N
0.739
ENSMLUG00000015142
Myotis lucifugus
ENSMLUG00000015142
N
0.739
ENSMLUG00000010127
Myotis lucifugus
ENSMLUG00000010127
N
0.739
ENSTBEG00000014930
Tupaia belangeri
ENSTBEG00000014930
N
0.739
ENSMLUG00000016194
Myotis lucifugus
ENSMLUG00000016194
N
0.739
ENSTBEG00000010863
Tupaia belangeri
ENSTBEG00000010863
N
0.739
Gm5699
Mus musculus
ENSMUSG00000087346
N
0.732
Gm5698
Mus musculus
ENSMUSG00000086151
N
0.732
ENSMLUG00000009822
Myotis lucifugus
ENSMLUG00000009822
N
0.729
ENSMLUG00000011599
Myotis lucifugus
ENSMLUG00000011599
N
0.729
ENSMLUG00000013085
Myotis lucifugus
ENSMLUG00000013085
N
0.729
ENSMLUG00000015043
Myotis lucifugus
ENSMLUG00000015043
N
0.729
ENSMLUG00000010456
Myotis lucifugus
ENSMLUG00000010456
N
0.725
ENSMLUG00000004992
Myotis lucifugus
ENSMLUG00000004992
N
0.725
ENSMLUG00000007617
Myotis lucifugus
ENSMLUG00000007617
N
0.725
ENSMLUG00000009447
Myotis lucifugus
ENSMLUG00000009447
N
0.714
ENSMLUG00000004521
Myotis lucifugus
ENSMLUG00000004521
N
0.714
ENSMLUG00000001244
Myotis lucifugus
ENSMLUG00000001244
N
0.714
ENSMLUG00000013041
Myotis lucifugus
ENSMLUG00000013041
N
0.714
ENSMLUG00000006641
Myotis lucifugus
ENSMLUG00000006641
N
0.714
ENSMLUG00000001217
Myotis lucifugus
ENSMLUG00000001217
N
0.714
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.710
ENSMLUG00000007513
Myotis lucifugus
ENSMLUG00000007513
N
0.710
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.704
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.704
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.704
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.704
AAH74336
Xenopus laevis
AAH74336
N
0.704
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.704
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.704
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.704
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.704
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.704
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.704
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.704
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.704
AAH92013
Xenopus laevis
AAH92013
N
0.704
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.704
THOC4
Gallus gallus
ENSGALG00000007237
N
0.704
THOC4
Homo sapiens
ENSG00000183684
N
0.704
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.704
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.704
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.704
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.704
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.704
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.704
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.704
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.704
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.704
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.704
tho4
Danio rerio
ENSDARG00000077732
N
0.704
Q58EA2
Xenopus laevis
Q58EA2
N
0.704