CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSMLUG00000007513
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000007513
T38679_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000006845
RRM
106
173
LLLSNLDFGVSDADIQQLFAEFGPLKKAGVHYDRSGRSLGTAHVHFERKADALEAMKQYNGVPLDVNR
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
83 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMLUG00000002626
Myotis lucifugus
ENSMLUG00000002626
N
0.985
ENSMLUG00000016194
Myotis lucifugus
ENSMLUG00000016194
N
0.956
ENSMLUG00000010127
Myotis lucifugus
ENSMLUG00000010127
N
0.956
ENSMLUG00000015043
Myotis lucifugus
ENSMLUG00000015043
N
0.942
ENSMLUG00000008923
Myotis lucifugus
ENSMLUG00000008923
N
0.941
ENSMLUG00000007634
Myotis lucifugus
ENSMLUG00000007634
N
0.941
ENSMLUG00000009247
Myotis lucifugus
ENSMLUG00000009247
N
0.941
ENSMLUG00000004521
Myotis lucifugus
ENSMLUG00000004521
N
0.928
ENSMLUG00000011599
Myotis lucifugus
ENSMLUG00000011599
N
0.928
ENSMLUG00000013041
Myotis lucifugus
ENSMLUG00000013041
N
0.928
ENSMLUG00000009822
Myotis lucifugus
ENSMLUG00000009822
N
0.928
ENSMLUG00000001217
Myotis lucifugus
ENSMLUG00000001217
N
0.928
ENSMLUG00000013085
Myotis lucifugus
ENSMLUG00000013085
N
0.928
ENSMLUG00000001244
Myotis lucifugus
ENSMLUG00000001244
N
0.928
ENSMLUG00000014480
Myotis lucifugus
ENSMLUG00000014480
N
0.926
ENSMLUG00000010456
Myotis lucifugus
ENSMLUG00000010456
N
0.926
ENSMLUG00000011212
Myotis lucifugus
ENSMLUG00000011212
N
0.926
ENSMLUG00000002669
Myotis lucifugus
ENSMLUG00000002669
N
0.926
ENSMLUG00000015142
Myotis lucifugus
ENSMLUG00000015142
N
0.912
ENSMLUG00000006641
Myotis lucifugus
ENSMLUG00000006641
N
0.899
ENSMLUG00000010927
Myotis lucifugus
ENSMLUG00000010927
N
0.899
ENSMLUG00000009447
Myotis lucifugus
ENSMLUG00000009447
N
0.899
ENSMLUG00000007617
Myotis lucifugus
ENSMLUG00000007617
N
0.897
ENSMLUG00000009449
Myotis lucifugus
ENSMLUG00000009449
N
0.884
ENSMLUG00000004992
Myotis lucifugus
ENSMLUG00000004992
N
0.882
ENSMLUG00000008410
Myotis lucifugus
ENSMLUG00000008410
N
0.882
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.868
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.855
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.843
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.843
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.843
AAH74336
Xenopus laevis
AAH74336
N
0.843
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.843
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.843
Q58EA2
Xenopus laevis
Q58EA2
N
0.843
AAH92013
Xenopus laevis
AAH92013
N
0.843
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.843
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.843
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.843
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.843
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.843
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.843
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.843
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.843
THOC4
Homo sapiens
ENSG00000183684
N
0.843
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.843
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.843
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.843
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.843
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.843
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.843
tho4
Danio rerio
ENSDARG00000077732
N
0.843
THOC4
Gallus gallus
ENSGALG00000007237
N
0.843
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.843
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.843
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.843
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.814
THOC4
Takifugu rubripes
ENSTRUG00000008828
N
0.814
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.814
ENSMLUG00000009555
Myotis lucifugus
ENSMLUG00000009555
N
0.800
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.800
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.786
Gm5699
Mus musculus
ENSMUSG00000087346
N
0.786
Gm5698
Mus musculus
ENSMUSG00000086151
N
0.786
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.783
e_gw.5.817.1
Branchiostoma floridae
e_gw.5.817.1
N
0.771
e_gw.394.68.1
Branchiostoma floridae
e_gw.394.68.1
N
0.771
ENSTNIG00000014136
Tetraodon nigroviridis
ENSTNIG00000014136
N
0.765
ENSTRUG00000003051
Takifugu rubripes
ENSTRUG00000003051
N
0.757
BGIBMGA005323
Bombyx mori
BGIBMGA005323
N
0.757
amel4_ncbi_hmm10980
Apis mellifera
amel4_ncbi_hmm10980
N
0.757
ISCW001860
Ixodes scapularis
ISCW001860
N
0.743
Smp_108820
Schistosoma mansoni
Smp_108820
N
0.743
PASA_GEN_1400063
Daphnia pulex
PASA_GEN_1400063
N
0.743
ENSGACG00000018178
Gasterosteus aculeatus
ENSGACG00000018178
N
0.743
CpipJ_CPIJ007834
Culex pipiens
CpipJ_CPIJ007834
N
0.729
AAEL005114
Aedes aegypti
AAEL005114
N
0.729
CPIJ007834
Culex quinquefasciatus
CPIJ007834
N
0.729
AGAP006733
Anopheles gambiae
AGAP006733
N
0.729
AAEL015263
Aedes aegypti
AAEL015263
N
0.729
ENSORLG00000001620
Oryzias latipes
ENSORLG00000001620
N
0.714
ENSTBEG00000013201
Tupaia belangeri
ENSTBEG00000013201
N
0.710
nasonia_NCBI_hmm488134
Nasonia vitripennis
nasonia_NCBI_hmm488134
N
0.700