CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000006641
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000006641
T38672_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000006060
RRM
27
94
LLLSNLDFRVSDADIQQLFAEFRPLKQAAVHYDRSGRSLGTAVHFERKADALEARKQYNGVPLDVNRR
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
75 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMLUG00000011212
Myotis lucifugus
ENSMLUG00000011212
N
0.971
ENSMLUG00000013041
Myotis lucifugus
ENSMLUG00000013041
N
0.957
ENSMLUG00000011599
Myotis lucifugus
ENSMLUG00000011599
N
0.957
ENSMLUG00000015043
Myotis lucifugus
ENSMLUG00000015043
N
0.957
ENSMLUG00000001217
Myotis lucifugus
ENSMLUG00000001217
N
0.957
ENSMLUG00000004521
Myotis lucifugus
ENSMLUG00000004521
N
0.957
ENSMLUG00000001244
Myotis lucifugus
ENSMLUG00000001244
N
0.957
ENSMLUG00000009822
Myotis lucifugus
ENSMLUG00000009822
N
0.957
ENSMLUG00000013085
Myotis lucifugus
ENSMLUG00000013085
N
0.957
ENSMLUG00000008923
Myotis lucifugus
ENSMLUG00000008923
N
0.957
ENSMLUG00000007634
Myotis lucifugus
ENSMLUG00000007634
N
0.957
ENSMLUG00000002669
Myotis lucifugus
ENSMLUG00000002669
N
0.942
ENSMLUG00000009447
Myotis lucifugus
ENSMLUG00000009447
N
0.942
ENSMLUG00000016194
Myotis lucifugus
ENSMLUG00000016194
N
0.942
ENSMLUG00000010456
Myotis lucifugus
ENSMLUG00000010456
N
0.942
ENSMLUG00000010127
Myotis lucifugus
ENSMLUG00000010127
N
0.942
ENSMLUG00000010927
Myotis lucifugus
ENSMLUG00000010927
N
0.928
ENSMLUG00000014480
Myotis lucifugus
ENSMLUG00000014480
N
0.928
ENSMLUG00000009449
Myotis lucifugus
ENSMLUG00000009449
N
0.913
ENSMLUG00000007617
Myotis lucifugus
ENSMLUG00000007617
N
0.913
ENSMLUG00000007513
Myotis lucifugus
ENSMLUG00000007513
N
0.899
ENSMLUG00000015142
Myotis lucifugus
ENSMLUG00000015142
N
0.899
ENSMLUG00000004992
Myotis lucifugus
ENSMLUG00000004992
N
0.899
ENSMLUG00000002626
Myotis lucifugus
ENSMLUG00000002626
N
0.884
ENSMLUG00000009247
Myotis lucifugus
ENSMLUG00000009247
N
0.870
ENSMLUG00000008410
Myotis lucifugus
ENSMLUG00000008410
N
0.855
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.812
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.812
Q58EA2
Xenopus laevis
Q58EA2
N
0.800
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.800
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.800
AAH74336
Xenopus laevis
AAH74336
N
0.800
AAH92013
Xenopus laevis
AAH92013
N
0.800
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.800
tho4
Danio rerio
ENSDARG00000077732
N
0.800
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.800
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.800
THOC4
Homo sapiens
ENSG00000183684
N
0.800
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.800
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.800
THOC4
Gallus gallus
ENSGALG00000007237
N
0.800
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.800
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.800
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.800
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.800
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.800
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.800
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.800
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.800
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.800
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.800
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.800
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.800
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.800
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.800
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.800
ENSMLUG00000009555
Myotis lucifugus
ENSMLUG00000009555
N
0.786
THOC4
Takifugu rubripes
ENSTRUG00000008828
N
0.771
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.771
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.771
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.757
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.754
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.743
ENSTRUG00000003051
Takifugu rubripes
ENSTRUG00000003051
N
0.729
amel4_ncbi_hmm10980
Apis mellifera
amel4_ncbi_hmm10980
N
0.729
Gm5699
Mus musculus
ENSMUSG00000087346
N
0.729
Gm5698
Mus musculus
ENSMUSG00000086151
N
0.729
e_gw.5.817.1
Branchiostoma floridae
e_gw.5.817.1
N
0.729
e_gw.394.68.1
Branchiostoma floridae
e_gw.394.68.1
N
0.729
BGIBMGA005323
Bombyx mori
BGIBMGA005323
N
0.714
ENSTBEG00000013201
Tupaia belangeri
ENSTBEG00000013201
N
0.714
ENSTNIG00000014136
Tetraodon nigroviridis
ENSTNIG00000014136
N
0.710
Smp_108820
Schistosoma mansoni
Smp_108820
N
0.700
ISCW001860
Ixodes scapularis
ISCW001860
N
0.700
PASA_GEN_1400063
Daphnia pulex
PASA_GEN_1400063
N
0.700