CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000016194
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000016194
T38775_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000014758
RRM
92
159
LLLSNLDFGVSDADIQQLFAEFGPLKQAAVHYDRSGRSLGTAHVHFERKADALEARKQYNGVPLDVNR
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
81 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMLUG00000010127
Myotis lucifugus
ENSMLUG00000010127
N
1.000
ENSMLUG00000015043
Myotis lucifugus
ENSMLUG00000015043
N
0.986
ENSMLUG00000008923
Myotis lucifugus
ENSMLUG00000008923
N
0.985
ENSMLUG00000007634
Myotis lucifugus
ENSMLUG00000007634
N
0.985
ENSMLUG00000011599
Myotis lucifugus
ENSMLUG00000011599
N
0.971
ENSMLUG00000009822
Myotis lucifugus
ENSMLUG00000009822
N
0.971
ENSMLUG00000013085
Myotis lucifugus
ENSMLUG00000013085
N
0.971
ENSMLUG00000014480
Myotis lucifugus
ENSMLUG00000014480
N
0.971
ENSMLUG00000002669
Myotis lucifugus
ENSMLUG00000002669
N
0.971
ENSMLUG00000011212
Myotis lucifugus
ENSMLUG00000011212
N
0.971
ENSMLUG00000010456
Myotis lucifugus
ENSMLUG00000010456
N
0.971
ENSMLUG00000013041
Myotis lucifugus
ENSMLUG00000013041
N
0.957
ENSMLUG00000001217
Myotis lucifugus
ENSMLUG00000001217
N
0.957
ENSMLUG00000004521
Myotis lucifugus
ENSMLUG00000004521
N
0.957
ENSMLUG00000001244
Myotis lucifugus
ENSMLUG00000001244
N
0.957
ENSMLUG00000015142
Myotis lucifugus
ENSMLUG00000015142
N
0.956
ENSMLUG00000007513
Myotis lucifugus
ENSMLUG00000007513
N
0.956
ENSMLUG00000006641
Myotis lucifugus
ENSMLUG00000006641
N
0.942
ENSMLUG00000009447
Myotis lucifugus
ENSMLUG00000009447
N
0.942
ENSMLUG00000007617
Myotis lucifugus
ENSMLUG00000007617
N
0.941
ENSMLUG00000002626
Myotis lucifugus
ENSMLUG00000002626
N
0.941
ENSMLUG00000010927
Myotis lucifugus
ENSMLUG00000010927
N
0.928
ENSMLUG00000009247
Myotis lucifugus
ENSMLUG00000009247
N
0.926
ENSMLUG00000004992
Myotis lucifugus
ENSMLUG00000004992
N
0.926
ENSMLUG00000009449
Myotis lucifugus
ENSMLUG00000009449
N
0.913
ENSMLUG00000008410
Myotis lucifugus
ENSMLUG00000008410
N
0.912
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.853
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.841
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.829
THOC4
Gallus gallus
ENSGALG00000007237
N
0.829
tho4
Danio rerio
ENSDARG00000077732
N
0.829
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.829
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.829
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.829
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.829
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.829
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.829
THOC4
Homo sapiens
ENSG00000183684
N
0.829
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.829
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.829
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.829
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.829
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.829
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.829
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.829
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.829
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.829
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.829
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.829
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.829
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.829
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.829
Q58EA2
Xenopus laevis
Q58EA2
N
0.829
AAH74336
Xenopus laevis
AAH74336
N
0.829
AAH92013
Xenopus laevis
AAH92013
N
0.829
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.829
THOC4
Takifugu rubripes
ENSTRUG00000008828
N
0.800
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.800
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.800
ENSMLUG00000009555
Myotis lucifugus
ENSMLUG00000009555
N
0.786
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.786
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.783
Gm5698
Mus musculus
ENSMUSG00000086151
N
0.771
Gm5699
Mus musculus
ENSMUSG00000087346
N
0.771
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.771
amel4_ncbi_hmm10980
Apis mellifera
amel4_ncbi_hmm10980
N
0.757
ENSTRUG00000003051
Takifugu rubripes
ENSTRUG00000003051
N
0.757
e_gw.394.68.1
Branchiostoma floridae
e_gw.394.68.1
N
0.757
e_gw.5.817.1
Branchiostoma floridae
e_gw.5.817.1
N
0.757
ENSTNIG00000014136
Tetraodon nigroviridis
ENSTNIG00000014136
N
0.750
BGIBMGA005323
Bombyx mori
BGIBMGA005323
N
0.743
Smp_108820
Schistosoma mansoni
Smp_108820
N
0.743
ENSTBEG00000013201
Tupaia belangeri
ENSTBEG00000013201
N
0.739
ISCW001860
Ixodes scapularis
ISCW001860
N
0.729
PASA_GEN_1400063
Daphnia pulex
PASA_GEN_1400063
N
0.729
AGAP006733
Anopheles gambiae
AGAP006733
N
0.714
CPIJ007834
Culex quinquefasciatus
CPIJ007834
N
0.714
AAEL015263
Aedes aegypti
AAEL015263
N
0.714
ENSGACG00000018178
Gasterosteus aculeatus
ENSGACG00000018178
N
0.714
AAEL005114
Aedes aegypti
AAEL005114
N
0.714
CpipJ_CPIJ007834
Culex pipiens
CpipJ_CPIJ007834
N
0.714