CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000013085
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000013085
T38745_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000011901
RRM
29
97
LLLSNLDFRVSDADIQQLFAEFGPLKQAAVHYDRSGRSLGTAHVHFERKADALEARKQYNGVPLDVNRG
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
81 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMLUG00000009822
Myotis lucifugus
ENSMLUG00000009822
N
1.000
ENSMLUG00000011599
Myotis lucifugus
ENSMLUG00000011599
N
1.000
ENSMLUG00000007634
Myotis lucifugus
ENSMLUG00000007634
N
0.986
ENSMLUG00000008923
Myotis lucifugus
ENSMLUG00000008923
N
0.986
ENSMLUG00000001217
Myotis lucifugus
ENSMLUG00000001217
N
0.971
ENSMLUG00000010456
Myotis lucifugus
ENSMLUG00000010456
N
0.971
ENSMLUG00000010127
Myotis lucifugus
ENSMLUG00000010127
N
0.971
ENSMLUG00000001244
Myotis lucifugus
ENSMLUG00000001244
N
0.971
ENSMLUG00000004521
Myotis lucifugus
ENSMLUG00000004521
N
0.971
ENSMLUG00000015043
Myotis lucifugus
ENSMLUG00000015043
N
0.971
ENSMLUG00000013041
Myotis lucifugus
ENSMLUG00000013041
N
0.971
ENSMLUG00000002669
Myotis lucifugus
ENSMLUG00000002669
N
0.971
ENSMLUG00000011212
Myotis lucifugus
ENSMLUG00000011212
N
0.971
ENSMLUG00000016194
Myotis lucifugus
ENSMLUG00000016194
N
0.971
ENSMLUG00000006641
Myotis lucifugus
ENSMLUG00000006641
N
0.957
ENSMLUG00000009447
Myotis lucifugus
ENSMLUG00000009447
N
0.957
ENSMLUG00000014480
Myotis lucifugus
ENSMLUG00000014480
N
0.957
ENSMLUG00000010927
Myotis lucifugus
ENSMLUG00000010927
N
0.942
ENSMLUG00000007617
Myotis lucifugus
ENSMLUG00000007617
N
0.942
ENSMLUG00000004992
Myotis lucifugus
ENSMLUG00000004992
N
0.928
ENSMLUG00000015142
Myotis lucifugus
ENSMLUG00000015142
N
0.928
ENSMLUG00000007513
Myotis lucifugus
ENSMLUG00000007513
N
0.928
ENSMLUG00000009449
Myotis lucifugus
ENSMLUG00000009449
N
0.928
ENSMLUG00000002626
Myotis lucifugus
ENSMLUG00000002626
N
0.913
ENSMLUG00000009247
Myotis lucifugus
ENSMLUG00000009247
N
0.899
ENSMLUG00000008410
Myotis lucifugus
ENSMLUG00000008410
N
0.884
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.826
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.826
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.814
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.814
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.814
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.814
tho4
Danio rerio
ENSDARG00000077732
N
0.814
THOC4
Homo sapiens
ENSG00000183684
N
0.814
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.814
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.814
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.814
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.814
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.814
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.814
THOC4
Gallus gallus
ENSGALG00000007237
N
0.814
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.814
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.814
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.814
AAH74336
Xenopus laevis
AAH74336
N
0.814
AAH92013
Xenopus laevis
AAH92013
N
0.814
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.814
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.814
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.814
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.814
Q58EA2
Xenopus laevis
Q58EA2
N
0.814
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.814
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.814
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.814
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.814
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.814
THOC4
Takifugu rubripes
ENSTRUG00000008828
N
0.800
ENSMLUG00000009555
Myotis lucifugus
ENSMLUG00000009555
N
0.800
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.786
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.786
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.771
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.768
Gm5698
Mus musculus
ENSMUSG00000086151
N
0.757
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.757
Gm5699
Mus musculus
ENSMUSG00000087346
N
0.757
e_gw.394.68.1
Branchiostoma floridae
e_gw.394.68.1
N
0.743
amel4_ncbi_hmm10980
Apis mellifera
amel4_ncbi_hmm10980
N
0.743
ENSTRUG00000003051
Takifugu rubripes
ENSTRUG00000003051
N
0.743
e_gw.5.817.1
Branchiostoma floridae
e_gw.5.817.1
N
0.743
Smp_108820
Schistosoma mansoni
Smp_108820
N
0.729
ENSTBEG00000013201
Tupaia belangeri
ENSTBEG00000013201
N
0.729
BGIBMGA005323
Bombyx mori
BGIBMGA005323
N
0.729
ENSTNIG00000014136
Tetraodon nigroviridis
ENSTNIG00000014136
N
0.725
ISCW001860
Ixodes scapularis
ISCW001860
N
0.714
PASA_GEN_1400063
Daphnia pulex
PASA_GEN_1400063
N
0.714
CPIJ007834
Culex quinquefasciatus
CPIJ007834
N
0.700
CpipJ_CPIJ007834
Culex pipiens
CpipJ_CPIJ007834
N
0.700
AAEL005114
Aedes aegypti
AAEL005114
N
0.700
AAEL015263
Aedes aegypti
AAEL015263
N
0.700
AGAP006733
Anopheles gambiae
AGAP006733
N
0.700
ENSGACG00000018178
Gasterosteus aculeatus
ENSGACG00000018178
N
0.700