CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000009973
T41946_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000010290
RRM
1
52
QEIHDLFKDYEIKYCYVDRNKRTAFVTLLNGEQAQSAIRRFHQHSLRGKEIS
ENSTGUP00000010290
RRM
62
132
LCITNLPLSLRIEEFEELVRAYGNVERCFLVYSELTGHSKGYGFVEYMKKDSAAKARLELLGKQLEESTLF
ENSTGUP00000010290
RRM
151
221
LCVDKLQKDCADSKELLQAFSLKYKPVFCQFAQDEDGGSGDFAVVEYESAEQAESVRGAMDGVTINGRRVQ
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER2
Gallus gallus
ENSGALG00000011026
N
0.871
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.871
RAVER2
Monodelphis domestica
ENSMODG00000001242
N
0.722
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.716
RAVER2
Oryctolagus cuniculus
ENSOCUG00000006221
N
0.714
RAVER2
Otolemur garnettii
ENSOGAG00000011157
N
0.706
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.706
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.706
RAVER2
Equus caballus
ENSECAG00000022014
N
0.706
RAVER2
Ornithorhynchus anatinus
ENSOANG00000008327
N
0.706
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.706
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.701
RAVER2
Loxodonta africana
ENSLAFG00000012508
N
0.701