CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Otolemur garnettii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOGAG00000011157
T39874_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000009986
RRM
9
51
YELKYCYVDRNKRTAFVTLLNGEQAQNAIQTFHQYSFRGKDLI
ENSOGAP00000009986
RRM
61
131
LCITNLPISFTLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKGFAARARLELLGKQLGTSVLF
ENSOGAP00000009986
RRM
150
220
LCVDKLPSDYRDSEELLQFFSSVHKPVFCQLAQDEGRCAGGFAVVEYGTAEQAEEAQQATVGATIQGSRVR
Links
Other
RRM
family RBPs
Other
Otolemur garnettii
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.887
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.870
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.866
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.859
RAVER2
Equus caballus
ENSECAG00000022014
N
0.856
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.854
RAVER2
Loxodonta africana
ENSLAFG00000012508
N
0.852
RAVER2
Tarsius syrichta
ENSTSYG00000006019
N
0.849
Ame_R013192
Ailuropoda melanoleuca
Ame_R013192
N
0.800
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.800
RAVER2
Choloepus hoffmanni
ENSCHOG00000007668
N
0.795
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.786
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.786
RAVER2
Homo sapiens
ENSG00000162437
N
0.782
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.782
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.775
RAVER2
Oryctolagus cuniculus
ENSOCUG00000006221
N
0.762
RAVER2
Gallus gallus
ENSGALG00000011026
N
0.747
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.747
RAVER2
Ornithorhynchus anatinus
ENSOANG00000008327
N
0.747
RAVER2
Monodelphis domestica
ENSMODG00000001242
N
0.743
Raver2
Mus musculus
ENSMUSG00000035275
N
0.743
Raver2
Rattus norvegicus
ENSRNOG00000023812
N
0.743
RAVER2
Cavia porcellus
ENSCPOG00000005986
N
0.733
RAVER2
Taeniopygia guttata
ENSTGUG00000009973
N
0.706