CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000008327
T39504_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000013237
RRM
5
52
ELLKDYELKYCYVDRNKRTAFVTLLNGEQAQSAIRTFHQHSLRGKDIV
ENSOANP00000013237
RRM
62
131
LCVTNLPASLTLQEFEELLRAYGNIERCFLVYSEVTGQSKGYGFVEYMKKDSAAKARVELMGKELRAGNL
ENSOANP00000013237
RRM
151
221
LCVDKLPSDFSDSDELVRLFSRVHNPVFCQFAQDEGSYVGGFAVVEYDTAEQAEEVQRATHGMTIQGTKVR
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER2
Equus caballus
ENSECAG00000022014
N
0.772
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.772
RAVER2
Loxodonta africana
ENSLAFG00000012508
N
0.767
RAVER2
Tarsius syrichta
ENSTSYG00000006019
N
0.762
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.762
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.757
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.751
RAVER2
Otolemur garnettii
ENSOGAG00000011157
N
0.747
RAVER2
Monodelphis domestica
ENSMODG00000001242
N
0.732
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.729
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.726
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.722
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.717
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.717
RAVER2
Homo sapiens
ENSG00000162437
N
0.717
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.717
RAVER2
Cavia porcellus
ENSCPOG00000005986
N
0.716
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.711
RAVER2
Gallus gallus
ENSGALG00000011026
N
0.706
RAVER2
Taeniopygia guttata
ENSTGUG00000009973
N
0.706