CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Gallus gallus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGALG00000011026
T37687_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000017943
RRM
1
52
QEIHDLFKDYEIKYCYVDRNKRTAFVTLLNGEQAQNAIQKFHQYSLRGKEIS
ENSGALP00000017943
RRM
62
132
LCITNLPISFTLEEFEELVRAYGNVERCFLVYNEVTGHSKGYGFVEYMKKDSAAKARLELLGKQLDESTLF
ENSGALP00000017943
RRM
151
221
LCVDKLQKDCSDSKELLQVFSLQYKPVFCQFAQDEDSCIGDFAVIEYETAEQAEKVQEAMDGTVIKGRRVQ
Links
Other
RRM
family RBPs
Other
Gallus gallus
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.990
RAVER2
Taeniopygia guttata
ENSTGUG00000009973
N
0.871
RAVER2
Equus caballus
ENSECAG00000022014
N
0.753
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.753
RAVER2
Oryctolagus cuniculus
ENSOCUG00000006221
N
0.748
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.747
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.747
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.747
RAVER2
Otolemur garnettii
ENSOGAG00000011157
N
0.747
RAVER2
Monodelphis domestica
ENSMODG00000001242
N
0.747
RAVER2
Loxodonta africana
ENSLAFG00000012508
N
0.742
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.738
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.737
RAVER2
Macropus eugenii
ENSMEUG00000012740
N
0.733
RAVER2
Homo sapiens
ENSG00000162437
N
0.728
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.728
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.728
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.728
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.725
RAVER2
Tarsius syrichta
ENSTSYG00000006019
N
0.716
Raver2
Mus musculus
ENSMUSG00000035275
N
0.714
Raver2
Rattus norvegicus
ENSRNOG00000023812
N
0.709
RAVER2
Anolis carolinensis
ENSACAG00000008443
N
0.709
RAVER2
Ornithorhynchus anatinus
ENSOANG00000008327
N
0.706