CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000001242
T39038_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000001487
RRM
4
52
HDLLKDYELKYCYVDRNKRTAFVTLLDGEQAQNAIQTFHQYSLRGKEIT
ENSMODP00000001487
RRM
62
131
LCITNLPPSFTIEEFEELVRTFGNIERCFLVYNETTGHSKGYGFVEYMKKDSAAKARSELLGKQLGSFIL
ENSMODP00000001487
RRM
151
221
LCVDKLPRDLTDSQELLQIFSFSHKPVFGQLAQDEGSYADGFAVVEYDSPEHAEDVQQAADGMTIKGSQVQ
ENSMODP00000001489
RRM
1
29
AFVTLLDGEQAQNAIQTFHQYSLRGKEIT
ENSMODP00000001489
RRM
39
108
LCITNLPPSFTIEEFEELVRTFGNIERCFLVYNETTGHSKGYGFVEYMKKDSAAKARSELLGKQLGSFIL
ENSMODP00000001489
RRM
128
198
LCVDKLPRDLTDSQELLQIFSFSHKPVFGQLAQDEGSYADGFAVVEYDSPEHAEDVQQAADGMTIKGSQVQ
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
27 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER2
Macropus eugenii
ENSMEUG00000012740
N
0.850
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.805
RAVER2
Equus caballus
ENSECAG00000022014
N
0.800
RAVER2
Loxodonta africana
ENSLAFG00000012508
N
0.795
Ame_R013192
Ailuropoda melanoleuca
Ame_R013192
N
0.787
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.785
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.784
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.784
RAVER2
Choloepus hoffmanni
ENSCHOG00000007668
N
0.780
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.774
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.766
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.756
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.756
RAVER2
Homo sapiens
ENSG00000162437
N
0.751
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.749
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.749
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.747
RAVER2
Gallus gallus
ENSGALG00000011026
N
0.747
RAVER2
Tarsius syrichta
ENSTSYG00000006019
N
0.747
RAVER2
Otolemur garnettii
ENSOGAG00000011157
N
0.743
Raver2
Mus musculus
ENSMUSG00000035275
N
0.732
Raver2
Rattus norvegicus
ENSRNOG00000023812
N
0.732
RAVER2
Ornithorhynchus anatinus
ENSOANG00000008327
N
0.732
RAVER2
Oryctolagus cuniculus
ENSOCUG00000006221
N
0.723
RAVER2
Taeniopygia guttata
ENSTGUG00000009973
N
0.722
RAVER2
Cavia porcellus
ENSCPOG00000005986
N
0.711