CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Oryctolagus cuniculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOCUG00000006221
T39642_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000005387
RRM
59
122
ILVRNLPQDCSCQEIHDLLKDYELKYCYVDRNKRTAFVTLLNGEQAQKAIQMFHQYSFRGKDLI
ENSOCUP00000005387
RRM
132
202
LCITNLPISFTLEEFEELVGGYGNVERCFLIYSEITGHSKGYGFVEYMKKDFAAKARLDLLGKQLGESALF
ENSOCUP00000005387
RRM
221
291
LCVDKLPGDYTDSEELLQYFSSVHKPVFCQLAQDEGSYVGDFAVVEYSTAEQAEEVQRAADGMTIKGSKVH
ENSOCUP00000020016
RRM
72
135
ILVRNLPQDCSCQEIHDLLKDYELKYCYVDRNKRTAFVTLLNGEQAQKAIQMFHQYSFRGKDLI
ENSOCUP00000020016
RRM
145
215
LCITNLPISFTLEEFEELVGGYGNVERCFLIYSEITGHSKGYGFVEYMKKDFAAKARLDLLGKQLGESALF
ENSOCUP00000020016
RRM
234
304
LCVDKLPGDYTDSEELLQYFSSVHKPVFCQLAQDEGSYVGDFAVVEYSTAEQAEEVQRAADGMTIKGSKVH
Links
Other
RRM
family RBPs
Other
Oryctolagus cuniculus
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.879
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.879
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.879
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.879
RAVER2
Homo sapiens
ENSG00000162437
N
0.879
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.864
Raver2
Rattus norvegicus
ENSRNOG00000023812
N
0.816
Raver2
Mus musculus
ENSMUSG00000035275
N
0.816
RAVER2
Equus caballus
ENSECAG00000022014
N
0.806
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.806
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.796
RAVER2
Loxodonta africana
ENSLAFG00000012508
N
0.796
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.786
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.777
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.772
RAVER2
Macropus eugenii
ENSMEUG00000012740
N
0.762
RAVER2
Otolemur garnettii
ENSOGAG00000011157
N
0.762
RAVER2
Tarsius syrichta
ENSTSYG00000006019
N
0.757
RAVER2
Anolis carolinensis
ENSACAG00000008443
N
0.752
RAVER2
Gallus gallus
ENSGALG00000011026
N
0.748
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.748
RAVER2
Monodelphis domestica
ENSMODG00000001242
N
0.723
Ame_R013192
Ailuropoda melanoleuca
Ame_R013192
N
0.723
RAVER2
Choloepus hoffmanni
ENSCHOG00000007668
N
0.718
RAVER2
Taeniopygia guttata
ENSTGUG00000009973
N
0.714