GA10247-RA (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0070305 T43114_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG7804
M137_0.6 		Drosophila melanogaster WGKRUGR RNAcompete
Ray et al.(2013)
RNCMPT00146 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0285131 RRM 109 177
FBpp0285131 RRM 194 246

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GL10927 Drosophila persimilis FBgn0148537 I 1.000
GF12452 Drosophila ananassae FBgn0089489 I 0.975
GK15864 Drosophila willistoni FBgn0217867 I 0.975
GE11522 Drosophila yakuba FBgn0229324 I 0.967
GI20724 Drosophila mojavensis FBgn0143459 I 0.967
GG19989 Drosophila erecta FBgn0112189 I 0.967
GH20198 Drosophila grimshawi FBgn0127662 I 0.967
GJ21868 Drosophila virilis FBgn0208985 I 0.967
TBPH Drosophila melanogaster FBgn0025790 I 0.959
GM15502 Drosophila sechellia FBgn0170420 I 0.959
GD25005 Drosophila simulans FBgn0196318 I 0.959
nasonia_NCBI_hmm274594 Nasonia vitripennis nasonia_NCBI_hmm274594 I 0.820
amel4_ncbi_hmm11035 Apis mellifera amel4_ncbi_hmm11035 I 0.811
PHUM575260 Pediculus humanus PHUM575260 I 0.797
CG7804 Drosophila melanogaster FBgn0036496 D 0.746
fgenesh1_pg.C_scaffold_6000249 Daphnia pulex fgenesh1_pg.C_scaffold_6000249 N 0.735
AGAP003497 Anopheles gambiae AGAP003497 N 0.724
BGIBMGA006832 Bombyx mori BGIBMGA006832 N 0.722
GD12565 Drosophila simulans FBgn0184292 I 0.721
BGIBMGA007518 Bombyx mori BGIBMGA007518 N 0.715
CPIJ014288 Culex quinquefasciatus CPIJ014288 N 0.707
e_gw1.17.468.1 Lottia gigantea e_gw1.17.468.1 I 0.707
CpipJ_CPIJ014288 Culex pipiens CpipJ_CPIJ014288 N 0.707
170286 Helobdella robusta 170286 I 0.702