GE11522 (Drosophila yakuba)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0229324 T44276_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG7804
M137_0.6 		Drosophila melanogaster WGKRUGR RNAcompete
Ray et al.(2013)
RNCMPT00146 		0.770
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0256532 RRM 109 177
FBpp0256532 RRM 194 246

Links

Other RRM family RBPs
Other Drosophila yakuba RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GG19989 Drosophila erecta FBgn0112189 I 1.000
TBPH Drosophila melanogaster FBgn0025790 I 0.992
GM15502 Drosophila sechellia FBgn0170420 I 0.992
GD25005 Drosophila simulans FBgn0196318 I 0.992
GA10247-RA Drosophila pseudoobscura FBgn0070305 I 0.967
GL10927 Drosophila persimilis FBgn0148537 I 0.967
GF12452 Drosophila ananassae FBgn0089489 I 0.967
GJ21868 Drosophila virilis FBgn0208985 I 0.959
GK15864 Drosophila willistoni FBgn0217867 I 0.959
GI20724 Drosophila mojavensis FBgn0143459 I 0.951
GH20198 Drosophila grimshawi FBgn0127662 I 0.951
nasonia_NCBI_hmm274594 Nasonia vitripennis nasonia_NCBI_hmm274594 I 0.836
amel4_ncbi_hmm11035 Apis mellifera amel4_ncbi_hmm11035 I 0.828
PHUM575260 Pediculus humanus PHUM575260 I 0.812
CG7804 Drosophila melanogaster FBgn0036496 D 0.770
fgenesh1_pg.C_scaffold_6000249 Daphnia pulex fgenesh1_pg.C_scaffold_6000249 N 0.742
AGAP003497 Anopheles gambiae AGAP003497 N 0.740
GD12565 Drosophila simulans FBgn0184292 I 0.738
BGIBMGA007518 Bombyx mori BGIBMGA007518 N 0.732
BGIBMGA006832 Bombyx mori BGIBMGA006832 N 0.730
CPIJ014288 Culex quinquefasciatus CPIJ014288 N 0.715
CpipJ_CPIJ014288 Culex pipiens CpipJ_CPIJ014288 N 0.715
170286 Helobdella robusta 170286 I 0.710
TARDBP Tursiops truncatus ENSTTRG00000001312 I 0.705
TARDBP Vicugna pacos ENSVPAG00000009543 I 0.705
TARDBP Taeniopygia guttata ENSTGUG00000003255 I 0.705
LOC100014246 Monodelphis domestica ENSMODG00000011233 I 0.705
LOC100051482 Equus caballus ENSECAG00000008338 I 0.705
TARDBP Erinaceus europaeus ENSEEUG00000003755 I 0.705
TARDBP Echinops telfairi ENSETEG00000004358 I 0.705
TARDBP Cavia porcellus ENSCPOG00000011619 I 0.705
ENSCAFG00000016759 Canis familiaris ENSCAFG00000016759 I 0.705
Ame_R011012 Ailuropoda melanoleuca Ame_R011012 I 0.705
ENSACAG00000011709 Anolis carolinensis ENSACAG00000011709 I 0.705
TARDBP Homo sapiens ENSG00000120948 D 0.705
TARDBP Loxodonta africana ENSLAFG00000014421 I 0.705
ENSPPYG00000001894 Pongo pygmaeus ENSPPYG00000001894 I 0.705
XR_021519.1 Pan troglodytes ENSPTRG00000000136 I 0.705
TARDBP Oryzias latipes ENSORLG00000003593 I 0.705
TARDBP Ornithorhynchus anatinus ENSOANG00000013320 I 0.705
TARDBP Macropus eugenii ENSMEUG00000006548 I 0.705
ENSMMUG00000007456 Macaca mulatta ENSMMUG00000007456 I 0.705
TARDBP Tupaia belangeri ENSTBEG00000000263 I 0.705